RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TAS2R40P59535 323 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 CDK18Q07002 472 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 XRCC4Q13426 336 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 NFE2L1Q14494 772 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 KYNUQ16719 465 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 NT5DC3Q86UY8 548 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 OOSP2Q86WS3 158 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 MAP7D3Q8IWC1 876 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 SPATA22Q8NHS9 363 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 FAF2Q96CS3 445 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 CBX8Q9HC52 389 aa13.67□□□□□ -0.22
SMARCA4-206ENST00000538456 SEC16AO15027 2179 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 DIDO1Q9BTC0 2240 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 OR6C74A6NCV1 312 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 F5H423 210 aaPredicted RBP13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 PMPCBO75439 489 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 LCA5LO95447 670 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 VARSP26640 1264 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 GSDMDP57764 484 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 ABRQ12979 859 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 ATP1A4Q13733 1029 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 NOMO1Q15155 1222 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 NFKBIBQ15653 356 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 FILIP1LQ4L180 1135 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 PLEKHS1Q5SXH7 462 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 TMTC4Q5T4D3 741 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 HGSNATQ68CP4 663 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 CCDC70Q6NSX1 233 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 ARMC6Q6NXE6 501 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 B4GALNT4Q76KP1 1039 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 DSELQ8IZU8 1212 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 IQCKQ8N0W5 287 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 RASGEF1AQ8N9B8 481 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 OR8K5Q8NH50 307 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 CPT1BQ92523 772 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 SNRNP40Q96DI7 357 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 C5orf34Q96MH7 638 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 NLNQ9BYT8 704 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 ZCCHC2Q9C0B9 1178 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 WWP1Q9H0M0 922 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 FANCEQ9HB96 536 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 IL26Q9NPH9 171 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 ASF1BQ9NVP2 202 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 UBP1Q9NZI7 540 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 FAM8A1Q9UBU6 413 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 CCDC88CQ9P219 2028 aa13.66□□□□□ -0.22
SMARCA4-206ENST00000538456 MDC1Q14676 2089 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 A0A087X0T9 212 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 WIPF3A6NGB9 483 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 UGT1A9O60656 530 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 NDST3O95803 873 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 RAB40ALP0C0E4 278 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 FAM228BP0C875 321 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 UGT1A6P19224 532 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 UGT1A1P22309 533 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 UGT1A4P22310 534 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 KPNA2P52292 529 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 DMPKQ09013 629 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 PPP2R5EQ16537 467 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 PTCHD3Q3KNS1 767 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 PLEKHN1Q494U1 663 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 TMEM220Q6QAJ8 160 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 FAM198BQ6UWH4 519 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 FAM151BQ6UXP7 276 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 MED25Q71SY5 747 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 DET1Q7L5Y6 550 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 HPS6Q86YV9 775 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 SRRM1Q8IYB3 904 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 SYTL1Q8IYJ3 562 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 CISD2Q8N5K1 135 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 ZBTB2Q8N680 514 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 PLD5Q8N7P1 536 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 BEND7Q8N7W2 519 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 TMEM102Q8N9M5 508 aaPredicted RBP13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 BRSK1Q8TDC3 778 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 NAT14Q8WUY8 206 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 RAPGEF5Q92565 580 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 C12orf66Q96MD2 445 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 LRFN5Q96NI6 719 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 RNF157Q96PX1 679 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 SMAD5Q99717 465 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 SLC25A51Q9H1U9 297 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 UGT1A7Q9HAW7 530 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 UGT1A10Q9HAW8 530 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 UGT1A8Q9HAW9 530 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 LATS2Q9NRM7 1088 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 SLC5A6Q9Y289 635 aa13.65□□□□□ -0.22
SMARCA4-206ENST00000538456 ANKRD17O75179 2603 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 FER1L5A0AVI2 2057 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 LRRD1A4D1F6 860 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 SLC9B1P1A6NJY1 282 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 TMEM150CB9EJG8 249 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 KCNJ13O60928 360 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 PROSCO94903 275 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 CBX6O95503 412 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 HLA-DPA1P20036 260 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 CYP2A7P20853 494 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 TNFRSF8P28908 595 aa13.64□□□□□ -0.23
SMARCA4-206ENST00000538456 OTX2P32243 289 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms