RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 PDIK1LQ8N165 341 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 CEP112Q8N8E3 955 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 OR2L2Q8NH16 312 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 IFI44Q8TCB0 444 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 JPH3Q8WXH2 748 aaPredicted RBP12.84□□□□□ -0.35
CHFR-216ENST00000538235 FAM136AQ96C01 138 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 CERS2Q96G23 380 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 RHOXF2Q9BQY4 288 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 MCMBPQ9BTE3 642 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 OR52A5Q9H2C5 316 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 DPEP2Q9H4A9 486 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 COG4Q9H9E3 785 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 IARS2Q9NSE4 1012 aaKnown RBP12.84□□□□□ -0.35
CHFR-216ENST00000538235 C20orf96Q9NUD7 363 aaPredicted RBP12.84□□□□□ -0.35
CHFR-216ENST00000538235 ZC3H7BQ9UGR2 993 aaKnown RBP12.84□□□□□ -0.35
CHFR-216ENST00000538235 UTP11Q9Y3A2 253 aaKnown RBP12.84□□□□□ -0.35
CHFR-216ENST00000538235 CFAP20Q9Y6A4 193 aaKnown RBP12.84□□□□□ -0.35
CHFR-216ENST00000538235 SLC5A10A0PJK1 596 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 CPED1A4D0V7 1026 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 KRT87PA6NCN2 255 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 NEMP2A6NFY4 417 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 MGAT4DA6NG13 374 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 SMAPO00193 183 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 F3P13726 295 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 RPS3P23396 243 aaKnown RBP eCLIP12.83□□□□□ -0.36
CHFR-216ENST00000538235 CSF2RBP32927 897 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 NSG1P42857 185 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 EIF3BP55884 814 aaKnown RBP12.83□□□□□ -0.36
CHFR-216ENST00000538235 CFHR1Q03591 330 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 CALCOCO2Q13137 446 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 LAMB3Q13751 1172 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 NR0B2Q15466 257 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 RBM20Q5T481 1227 aaKnown RBP12.83□□□□□ -0.36
CHFR-216ENST00000538235 ARMC3Q5W041 872 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 METRNLQ641Q3 311 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 IYDQ6PHW0 289 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 ZNF438Q7Z4V0 828 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 AMZ2Q86W34 360 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 CNTN4Q8IWV2 1026 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 MNS1Q8NEH6 495 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 INSM2Q96T92 566 aaPredicted RBP12.83□□□□□ -0.36
CHFR-216ENST00000538235 DUSP23Q9BVJ7 150 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 ZCCHC2Q9C0B9 1178 aaKnown RBP12.83□□□□□ -0.36
CHFR-216ENST00000538235 WWP1Q9H0M0 922 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 ANKZF1Q9H8Y5 726 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 FBXO5Q9UKT4 447 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 PADI4Q9UM07 663 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 DOLKQ9UPQ8 538 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 RUVBL2Q9Y230 463 aaKnown RBP12.83□□□□□ -0.36
CHFR-216ENST00000538235 CRYL1Q9Y2S2 319 aa12.83□□□□□ -0.36
CHFR-216ENST00000538235 A0A1W2PNU3 283 aaPredicted RBP12.82□□□□□ -0.36
CHFR-216ENST00000538235 UBA6A0AVT1 1052 aaPredicted RBP12.82□□□□□ -0.36
CHFR-216ENST00000538235 PMS2P1A4D2B8 440 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 PRMT5O14744 637 aaPredicted RBP12.82□□□□□ -0.36
CHFR-216ENST00000538235 HAUS5O94927 633 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 POLBP06746 335 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 FAM153BP0C7A2 387 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 TPBGLP0DKB5 382 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 ALPPL2P10696 532 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 FMO4P31512 558 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 CSE1LP55060 971 aaKnown RBP12.82□□□□□ -0.36
CHFR-216ENST00000538235 DAB2P98082 770 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 INSM1Q01101 510 aaPredicted RBP12.82□□□□□ -0.36
CHFR-216ENST00000538235 GBX1Q14549 363 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 NR1D2Q14995 579 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 BRD3Q15059 726 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 INAVAQ3KP66 663 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 FAM153CQ494X1 144 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 TEX35Q5T0J7 233 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 TEDDM1Q5T9Z0 273 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 ABRAXAS1Q6UWZ7 409 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 CCDC25Q86WR0 208 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 SDR16C5Q8N3Y7 309 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 OTUD6BQ8N6M0 293 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 C2CD4AQ8NCU7 369 aaPredicted RBP12.82□□□□□ -0.36
CHFR-216ENST00000538235 BBOF1Q8ND07 529 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 HM13Q8TCT9 377 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 LRRC39Q96DD0 335 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 DCUN1D1Q96GG9 259 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 TTC25Q96NG3 672 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 NDNQ99608 321 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 CDC6Q99741 560 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 CCDC3Q9BQI4 270 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 SLC32A1Q9H598 525 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 LRRC4CQ9HCJ2 640 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 MOCS1Q9NZB8 636 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 NINJ2Q9NZG7 142 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 OGFRQ9NZT2 677 aa12.82□□□□□ -0.36
CHFR-216ENST00000538235 TCRBV9S1A1TA0A576 114 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 MAGEB16A2A368 324 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 FAM149AA5PLN7 773 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 PDZK1P1A8MUH7 402 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 B4GAT1O43505 415 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 HYAL3O43820 417 aaPredicted RBP12.81□□□□□ -0.36
CHFR-216ENST00000538235 RFPL3O75679 317 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 AP2A2O94973 939 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 GMPRP36959 345 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 FASLGP48023 281 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 TTPAP49638 278 aa12.81□□□□□ -0.36
CHFR-216ENST00000538235 BOP1Q14137 746 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms