RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 NELFEP18615 380 aaKnown RBP10.6□□□□□ -0.71
CLIP1-210ENST00000538120 HSD3B2P26439 372 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 SEMG2Q02383 582 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 CRTC1Q6UUV9 634 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 B3GNT6Q6ZMB0 384 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 BNC2Q6ZN30 1099 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-210ENST00000538120 AMIGO2Q86SJ2 522 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 ADIPOR2Q86V24 386 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 SERPINA9Q86WD7 417 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 CPNE9Q8IYJ1 553 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 PAF1Q8N7H5 531 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 MYLIPQ8WY64 445 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 LYSMD1Q96S90 227 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 C19orf43Q9BQ61 176 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 BOCQ9BWV1 1114 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 HECAQ9UBI9 543 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-210ENST00000538120 TRMT6Q9UJA5 497 aaKnown RBP10.6□□□□□ -0.71
CLIP1-210ENST00000538120 RNF112Q9ULX5 631 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 PPIL1Q9Y3C6 166 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 HEMK1Q9Y5R4 338 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-210ENST00000538120 PRSS21Q9Y6M0 314 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 NOTCH4Q99466 2003 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 TRBV5-4A0A0C4DH59 114 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 A0A1B0GTL3 188 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 NPIPB15A6NHN6 443 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-210ENST00000538120 C5orf67F2Z3F1 127 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 IFRD1O00458 451 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-210ENST00000538120 BTN3A1O00481 513 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 PFDN6O15212 129 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 PRAMEF1O95521 474 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 THRAP10827 490 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 UGT1A6P19224 532 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 CHRM3P20309 590 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 UGT1A1P22309 533 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 UGT1A4P22310 534 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 SERPINA4P29622 427 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 ADSLP30566 484 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-210ENST00000538120 HOXA9P31269 272 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 UGT1A3P35503 534 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 UGT1A5P35504 534 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 SNRPD1P62314 119 aaKnown RBP10.6□□□□□ -0.71
CLIP1-210ENST00000538120 UBE3AQ05086 875 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 MYBPC3Q14896 1274 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 NRF1Q16656 503 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 PPP1R3AQ16821 1122 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 ARHGAP15Q53QZ3 475 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 RARS2Q5T160 578 aaKnown RBP10.6□□□□□ -0.71
CLIP1-210ENST00000538120 TMEM215Q68D42 235 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 CEP70Q8NHQ1 597 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 HMGCLL1Q8TB92 370 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 LINGO1Q96FE5 620 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 NPAS2Q99743 824 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 BBS2Q9BXC9 721 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 ZBTB26Q9HCK0 441 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 SPHK2Q9NRA0 654 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 NDUFA13Q9P0J0 144 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 RAB26Q9ULW5 256 aa10.6□□□□□ -0.71
CLIP1-210ENST00000538120 HELZP42694 1942 aaKnown RBP10.59□□□□□ -0.71
CLIP1-210ENST00000538120 SUPT3HB4E1H0 165 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 PDLIM1O00151 329 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 PRMT5O14744 637 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-210ENST00000538120 TRIM24O15164 1050 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 SUPT3HO75486 399 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 RNASEH2AO75792 299 aaKnown RBP10.59□□□□□ -0.71
CLIP1-210ENST00000538120 FGF4P08620 206 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 PABPC1P11940 636 aaKnown RBP10.59□□□□□ -0.71
CLIP1-210ENST00000538120 GFAPP14136 432 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 TYRP14679 529 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 SYN1P17600 705 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 EEF1DP29692 281 aaKnown RBP10.59□□□□□ -0.71
CLIP1-210ENST00000538120 SLC5A2P31639 672 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 FOXA1P55317 472 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 NFATC2Q13469 925 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 CYLC2Q14093 348 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-210ENST00000538120 HERC3Q15034 1050 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 CHRNA6Q15825 494 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 CARD16Q5EG05 197 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 FBXO48Q5FWF7 155 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 LY6G5CQ5SRR4 150 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 ZNF697Q5TEC3 545 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 CERS6Q6ZMG9 384 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 DPY19L3Q6ZPD9 716 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 SNX20Q7Z614 316 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 GRASPQ7Z6J2 395 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-210ENST00000538120 KIAA0907Q7Z7F0 614 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-210ENST00000538120 ADGRG2Q8IZP9 1017 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 STK40Q8N2I9 435 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 FBXO39Q8N4B4 442 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 CHST14Q8NCH0 376 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 RP9Q8TA86 221 aaKnown RBP10.59□□□□□ -0.71
CLIP1-210ENST00000538120 LKAAEAR1Q8TD35 194 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 C17orf50Q8WW18 174 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 ZNF707Q96C28 371 aaPredicted RBP10.59□□□□□ -0.71
CLIP1-210ENST00000538120 C3orf30Q96M34 536 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 MRPL1Q9BYD6 325 aaKnown RBP10.59□□□□□ -0.71
CLIP1-210ENST00000538120 SEMA6AQ9H2E6 1030 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 SUV39H2Q9H5I1 410 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 ASB8Q9H765 288 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 TMCO1Q9UM00 188 aa10.59□□□□□ -0.71
CLIP1-210ENST00000538120 DHRS7Q9Y394 339 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms