RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 HMX1Q9NP08 348 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 SAGE1Q9NXZ1 904 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 PNMA8BQ9ULN7 279 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 ZFC3H1O60293 1989 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 CLDN24A6NM45 220 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 A8MV72 311 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 EFCAB9A8MZ26 197 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 HACD1B0YJ81 288 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 TRIM77I1YAP6 450 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 ENPP3O14638 875 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 MDM4O15151 490 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 PRKD3O94806 890 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 ITGB3P05106 788 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 FSHRP23945 695 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 YWHAQP27348 245 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 CD6P30203 668 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 FMO4P31512 558 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 THPOP40225 353 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 INCA1Q0VD86 236 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 STARD3Q14849 445 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 PLEKHG6Q3KR16 790 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 DCAF4L1Q3SXM0 396 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 VARS2Q5ST30 1063 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 UBE2Q1Q7Z7E8 422 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 PROSER1Q86XN7 944 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 TXNDC5Q8NBS9 432 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 GALNT6Q8NCL4 622 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 MCOLN3Q8TDD5 553 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 GPR78Q96P69 363 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 POMKQ9H5K3 350 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 ZFP14Q9HCL3 533 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 TNFRSF12AQ9NP84 129 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 LTB4R2Q9NPC1 389 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 WDR70Q9NW82 654 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 TAS2R9Q9NYW1 312 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 PCDHGA10Q9Y5H3 936 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 MAGED1Q9Y5V3 778 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 KRT87PA6NCN2 255 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 CTDSP2O14595 271 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 KATNA1O75449 491 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 CAPN3P20807 821 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 SAT1P21673 171 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 CES1P23141 567 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 PIGAP37287 484 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 MAP2K4P45985 399 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 SLC9A3P48764 834 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 LIPEQ05469 1076 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 TMEM132DQ14C87 1099 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 UGT3A2Q3SY77 523 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 COQ5Q5HYK3 327 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 UBXN11Q5T124 520 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 PXDC1Q5TGL8 231 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 CUZD1Q86UP6 607 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 KCNMB4Q86W47 210 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 IFNEQ86WN2 208 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 ZDHHC13Q8IUH4 622 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 TP53I13Q8NBR0 393 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 GTF2H4Q92759 462 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 PGLYRP2Q96PD5 576 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 C6orf62Q9GZU0 229 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 NXF2Q9GZY0 626 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 ASB7Q9H672 318 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 KLK14Q9P0G3 267 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 ERVK-18Q9QC07 812 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 NUDT5Q9UKK9 219 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 MKLN1Q9UL63 735 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 ACOT9Q9Y305 439 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 PCDHGB6Q9Y5F9 930 aa11.22□□□□□ -0.61
SEMA4D-221ENST00000537934 M0QZ92 97 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 AP3D1O14617 1153 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 PDPK1O15530 556 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 SSX4O60224 188 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 RECQL4O94761 1208 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 MED26O95402 600 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 ALDOCP09972 364 aaKnown RBP11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 IL7P13232 177 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 ATP5F1P24539 256 aaPredicted RBP11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 PSMB9P28065 219 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 RYKP34925 604 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 TGFBR1P36897 503 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 ASPAP45381 313 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 PRIM2P49643 509 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 ATN1P54259 1190 aaPredicted RBP11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 BNC1Q01954 994 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 KIF19Q2TAC6 998 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 ZNF699Q32M78 642 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 PARP15Q460N3 678 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 ZNF691Q5VV52 312 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 CES5AQ6NT32 575 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 FBLIM1Q8WUP2 373 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 RPL3LQ92901 407 aaKnown RBP11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 SNAPC3Q92966 411 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 KIF12Q96FN5 646 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 REXO5Q96IC2 774 aaKnown RBP11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 MRPL57Q9BQC6 102 aaKnown RBP11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 ACAT2Q9BWD1 397 aa11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 MRPL9Q9BYD2 267 aaKnown RBP11.21□□□□□ -0.61
SEMA4D-221ENST00000537934 NUAK2Q9H093 628 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms