RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 ALG2Q9H553 416 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 RC3H2Q9HBD1 1191 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 BRD7Q9NPI1 651 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 TMEM39AQ9NV64 488 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 MTMR10Q9NXD2 777 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 MTMR4Q9NYA4 1195 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 SLC17A6Q9P2U8 582 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 PRKAG2Q9UGJ0 569 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 RNF6Q9Y252 685 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 TNPO3Q9Y5L0 923 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 GMPPBQ9Y5P6 360 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 HACD1B0YJ81 288 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 MUSKO15146 869 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 ST8SIA5O15466 376 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 MT-ND1P03886 318 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 SRCP12931 536 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 FSHRP23945 695 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 CD6P30203 668 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 CA5AP35218 305 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 PIK3CBP42338 1070 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 RPL35P42766 123 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 CCR10P46092 362 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 BRCC3P46736 316 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 LIG4P49917 911 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 PRELPP51888 382 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 ERVK-8P63133 956 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 ZNF534Q76KX8 674 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 MRPL10Q7Z7H8 261 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 IFNEQ86WN2 208 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 SVOPLQ8N434 492 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 ZNF540Q8NDQ6 660 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 C3orf58Q8NDZ4 430 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 OR5T2Q8NGG2 359 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 ASB15Q8WXK1 588 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 ASB12Q8WXK4 309 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 MBOAT4Q96T53 435 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 PI4K2AQ9BTU6 479 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 TRIM54Q9BYV2 358 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 SHARPINQ9H0F6 387 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 ELOVL6Q9H5J4 265 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 CMTM6Q9NX76 183 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 GTSE1Q9NYZ3 720 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 CD274Q9NZQ7 290 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 SCML1Q9UN30 329 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 TCRBV5S1A1TA0A578 114 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 BCLAF3A2AJT9 711 aaKnown RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 OR2A25A4D2G3 310 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 SH3D21A4FU49 640 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 B4DXG7 233 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 SLC16A6O15403 523 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 MSH4O15457 936 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 PPP1R11O60927 126 aaPredicted RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 PAPSS2O95340 614 aaPredicted RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 LSM8O95777 96 aaKnown RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 TNNC2P02585 160 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 CYP11A1P05108 521 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 RAP2AP10114 183 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 RPS3P23396 243 aaKnown RBP eCLIP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 SLC6A2P23975 617 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 PIGAP37287 484 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 PPP3CCP48454 512 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 LIMK2P53671 638 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 ASAH1Q13510 395 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 GRM7Q14831 915 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 COL28A1Q2UY09 1125 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 FAM98BQ52LJ0 330 aaKnown RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 GNASQ5JWF2 1037 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 TMEM270Q6UE05 265 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 NPNTQ6UXI9 565 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 TFAP2EQ6VUC0 442 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 PIWIL4Q7Z3Z4 852 aaKnown RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 TXNRD3Q86VQ6 643 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 MYDGFQ969H8 173 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 NSMCE2Q96MF7 247 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 GPR137Q96N19 417 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 PIP5K1AQ99755 562 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 SLC19A3Q9BZV2 496 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 PPIL3Q9H2H8 161 aaKnown RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 CLEC4MQ9H2X3 399 aaPredicted RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 MEAF6Q9HAF1 191 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 RDH8Q9NYR8 311 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 UPK1AO00322 258 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 ERN1O75460 977 aaKnown RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 TGM6O95932 706 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 MT-ND2P03891 347 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 POLBP06746 335 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 TCF3P15923 654 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 NUP62P37198 522 aaPredicted RBP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 MASP1P48740 699 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 CDK8P49336 464 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 UBXN2AP68543 259 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 DAB2P98082 770 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 CDH17Q12864 832 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 POU4F3Q15319 338 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 PCBP1Q15365 356 aaKnown RBP eCLIP8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 PADI6Q6TGC4 694 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 PLET1Q6UQ28 207 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 BRINP3Q76B58 766 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 RRM2BQ7LG56 351 aa8.42□□□□□ -1.06
SRGAP1-202ENST00000537556 TMPRSS9Q7Z410 1059 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms