RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 GRPEL2Q8TAA5 225 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 LRRC15Q8TF66 581 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 RIT1Q92963 219 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 C7orf26Q96N11 449 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 INPP4AQ96PE3 977 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 MGME1Q9BQP7 344 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 NMUR2Q9GZQ4 415 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 CHMP1AQ9HD42 196 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 RNF19AQ9NV58 838 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 YDJCA8MPS7 323 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 CLDN25C9JDP6 229 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 PIAS1O75925 651 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 NR4A1P22736 598 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 HOXC12P31275 282 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 NAE1Q13564 534 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 CA9Q16790 459 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 LIN52Q52LA3 116 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 CERCAMQ5T4B2 595 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 RANBP3LQ86VV4 465 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 SAMD14Q8IZD0 417 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 ZBTB2Q8N680 514 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 ZMIZ2Q8NF64 920 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 TMCO6Q96DC7 493 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 CLPTM1LQ96KA5 538 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 DEC1Q9P2X7 70 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 UBIAD1Q9Y5Z9 338 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 SLC15A5A6NIM6 579 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 BHMG1C9JSJ3 638 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 ZNF208O43345 1280 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 DDNO94850 711 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 CALCAP01258 141 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 GSTT2BP0CG30 244 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 CHRM1P11229 460 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 COL6A1P12109 1028 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 ITIH1P19827 911 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 PRR5P85299 388 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 FOXR2Q6PJQ5 311 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 FRMD7Q6ZUT3 714 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 RALGPS2Q86X27 583 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 OR2L3Q8NG85 312 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 OR5B17Q8NGF7 314 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 PNPT1Q8TCS8 783 aaKnown RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 PPP1R13LQ8WUF5 828 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 TWIST2Q8WVJ9 160 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 ACOT12Q8WYK0 555 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 AKT1S1Q96B36 256 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 UNC93B1Q9H1C4 597 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 LHX5Q9H2C1 402 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 RC3H2Q9HBD1 1191 aaKnown RBP10.53□□□□□ -0.72
CLIP1-209ENST00000537178 IFT46Q9NQC8 304 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 COLEC10Q9Y6Z7 277 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 TAF1P21675 1872 aa10.53□□□□□ -0.72
CLIP1-209ENST00000537178 CPSF4LA6NMK7 179 aaKnown RBP10.52□□□□□ -0.72
CLIP1-209ENST00000537178 MATN2O00339 956 aa10.52□□□□□ -0.72
CLIP1-209ENST00000537178 GABRR2P28476 465 aa10.52□□□□□ -0.72
CLIP1-209ENST00000537178 HNRNPH3P31942 346 aaKnown RBP10.52□□□□□ -0.72
CLIP1-209ENST00000537178 MSX2P35548 267 aaPredicted RBP10.52□□□□□ -0.72
CLIP1-209ENST00000537178 SPAM1P38567 509 aa10.52□□□□□ -0.72
CLIP1-209ENST00000537178 VSTM1Q6UX27 236 aa10.52□□□□□ -0.72
CLIP1-209ENST00000537178 SVOPLQ8N434 492 aa10.52□□□□□ -0.72
CLIP1-209ENST00000537178 STYXQ8WUJ0 223 aa10.52□□□□□ -0.72
CLIP1-209ENST00000537178 KAT2AQ92830 837 aa10.52□□□□□ -0.72
CLIP1-209ENST00000537178 CEP295NLQ96MC4 621 aa10.52□□□□□ -0.72
CLIP1-209ENST00000537178 PWWP2AQ96N64 755 aa10.52□□□□□ -0.72
CLIP1-209ENST00000537178 IPPKQ9H8X2 491 aa10.52□□□□□ -0.72
CLIP1-209ENST00000537178 MARCH7Q9H992 704 aa10.52□□□□□ -0.72
CLIP1-209ENST00000537178 DNAJC28Q9NX36 388 aa10.52□□□□□ -0.72
CLIP1-209ENST00000537178 DERAQ9Y315 318 aa10.52□□□□□ -0.72
CLIP1-209ENST00000537178 PRPS2P11908 318 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 ECHS1P30084 290 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 HTR7P34969 479 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 MAPK12P53778 367 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 LCP2Q13094 533 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 TEAD4Q15561 434 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 RBM15BQ8NDT2 890 aaKnown RBP10.52□□□□□ -0.73
CLIP1-209ENST00000537178 ZNF639Q9UID6 485 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 CDH22Q9UJ99 828 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 PCP4L1A6NKN8 68 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 ANXA2P2A6NMY6 339 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 TP73O15350 636 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 GLUD1P00367 558 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 ANXA2P07355 339 aaKnown RBP10.52□□□□□ -0.73
CLIP1-209ENST00000537178 AZGP1P25311 298 aaKnown RBP10.52□□□□□ -0.73
CLIP1-209ENST00000537178 CMPK1P30085 196 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 CASP9P55211 416 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 CACNG1Q06432 222 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 SNAP47Q5SQN1 464 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 SLC30A6Q6NXT4 461 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 MED27Q6P2C8 311 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 PRR23BQ6ZRT6 265 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 OR4C6Q8NH72 309 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 EXOSC8Q96B26 276 aaKnown RBP10.52□□□□□ -0.73
CLIP1-209ENST00000537178 DNAJC19Q96DA6 116 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 FEM1CQ96JP0 617 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 SLC6A15Q9H2J7 730 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 KAT8Q9H7Z6 458 aaKnown RBP10.52□□□□□ -0.73
CLIP1-209ENST00000537178 LRRC4CQ9HCJ2 640 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 CYP3A7-CYP3A51PA0A087WV96 503 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 SERPINA3P01011 423 aa10.52□□□□□ -0.73
CLIP1-209ENST00000537178 ZNF823P16415 610 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms