RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ZNF367Q7RTV3 350 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 SETD9Q8NE22 299 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 B3GALT6Q96L58 329 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 COG8Q96MW5 612 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 KXD1Q9BQD3 176 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 DCLK3Q9C098 648 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 NT5C3AQ9H0P0 336 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 CATSPERBQ9H7T0 1116 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 PSTPIP2Q9H939 334 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 PPCSQ9HAB8 311 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 ZNF302Q9NR11 478 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 MRPL17Q9NRX2 175 aaKnown RBP5.55□□□□□ -1.52
CLIP1-207ENST00000536634 PLK2Q9NYY3 685 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 GRHL1Q9NZI5 618 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 RAI2Q9Y5P3 530 aa5.55□□□□□ -1.52
CLIP1-207ENST00000536634 MYO18BQ8IUG5 2567 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 OR6C68A6NDL8 312 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 LACTBL1A8MY62 500 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 IFIT3O14879 490 aaKnown RBP5.54□□□□□ -1.52
CLIP1-207ENST00000536634 IRAK2O43187 625 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 LRP3O75074 770 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 URODP06132 367 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 CCKBRP32239 447 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 MLH1P40692 756 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 RPS9P46781 194 aaKnown RBP5.54□□□□□ -1.52
CLIP1-207ENST00000536634 ARL4CP56559 192 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 Q0VFX4 171 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 HNF4GQ14541 408 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 CCDC6Q16204 474 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 ZNF284Q2VY69 593 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 CEP55Q53EZ4 464 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 FNBP1LQ5T0N5 605 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 TWF2Q6IBS0 349 aaKnown RBP5.54□□□□□ -1.52
CLIP1-207ENST00000536634 KIAA1161Q6NSJ0 714 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 GJB7Q6PEY0 223 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 CYP26C1Q6V0L0 522 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 SERPINA11Q86U17 422 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 PALB2Q86YC2 1186 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 RNF168Q8IYW5 571 aaPredicted RBP5.54□□□□□ -1.52
CLIP1-207ENST00000536634 SRBD1Q8N5C6 995 aaKnown RBP5.54□□□□□ -1.52
CLIP1-207ENST00000536634 ITFG1Q8TB96 612 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 ADAMTS14Q8WXS8 1223 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 NCSTNQ92542 709 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 RRP36Q96EU6 259 aaKnown RBP5.54□□□□□ -1.52
CLIP1-207ENST00000536634 THOC3Q96J01 351 aaKnown RBP5.54□□□□□ -1.52
CLIP1-207ENST00000536634 TMEM204Q9BSN7 226 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 SPZ1Q9BXG8 430 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 LHPPQ9H008 270 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 LY9Q9HBG7 655 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 RASSF1Q9NS23 344 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 CDH7Q9ULB5 785 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 GPR52Q9Y2T5 361 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 PRG3Q9Y2Y8 225 aaPredicted RBP5.54□□□□□ -1.52
CLIP1-207ENST00000536634 ATMQ13315 3056 aa5.54□□□□□ -1.52
CLIP1-207ENST00000536634 APC2O95996 2303 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 ACACAQ13085 2346 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 HECTD1Q9ULT8 2610 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 TDRD15B5MCY1 1934 aaKnown RBP5.53□□□□□ -1.52
CLIP1-207ENST00000536634 TICRRQ7Z2Z1 1910 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 SAC3D1A6NKF1 404 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 OR6C75A6NL08 312 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 SRRM3A6NNA2 597 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-207ENST00000536634 FAM86B1E9PN63 330 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 MS4A18H0YCH9 400 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 LIASO43766 372 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 FAM86B2P0C5J1 330 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 MYZAPP0CAP1 466 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 TNFRSF8P28908 595 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 KIF5BP33176 963 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 HNF1BP35680 557 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 MAGEA9P43362 315 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 CDH12P55289 794 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 SF3A2Q15428 464 aaKnown RBP5.53□□□□□ -1.52
CLIP1-207ENST00000536634 RPE65Q16518 533 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 ZNF585BQ52M93 769 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 INO80DQ53TQ3 878 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-207ENST00000536634 DNTTIP2Q5QJE6 756 aaKnown RBP5.53□□□□□ -1.52
CLIP1-207ENST00000536634 ANKRD45Q5TZF3 282 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 OTUD1Q5VV17 481 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-207ENST00000536634 DENND1BQ6P3S1 775 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 CRELD2Q6UXH1 353 aaPredicted RBP5.53□□□□□ -1.52
CLIP1-207ENST00000536634 TICAM2Q86XR7 235 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 ZDHHC23Q8IYP9 409 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 UBE2Q2Q8WVN8 375 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 NEUROG1Q92886 237 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 FGF13Q92913 245 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 SCLT1Q96NL6 688 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 MAP7D2Q96T17 732 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 KRTAP1-5Q9BYS1 174 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 PLA2G2FQ9BZM2 168 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 HEBP1Q9NRV9 189 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 HIF1ANQ9NWT6 349 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 C2orf42Q9NWW7 574 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 SEC63Q9UGP8 760 aaKnown RBP5.53□□□□□ -1.52
CLIP1-207ENST00000536634 RAB23Q9ULC3 237 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 FZD10Q9ULW2 581 aa5.53□□□□□ -1.52
CLIP1-207ENST00000536634 PIN4Q9Y237 131 aaKnown RBP5.53□□□□□ -1.52
CLIP1-207ENST00000536634 ASXL3Q9C0F0 2248 aa5.52□□□□□ -1.53
CLIP1-207ENST00000536634 VWA8A3KMH1 1905 aa5.52□□□□□ -1.53
CLIP1-207ENST00000536634 NBPF19A0A087WUL8 3843 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms