RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 PATE1Q8WXA2 126 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 SEC14L1Q92503 715 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 ART4Q93070 314 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 LINC00615Q96LM1 132 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-205ENST00000536255 FCRL3Q96P31 734 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-205ENST00000536255 TCF12Q99081 682 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 TSSK1BQ9BXA7 367 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 PHACTR1Q9C0D0 580 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 NRSN2Q9GZP1 204 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 SYNDIG1Q9H7V2 258 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 FAM114A2Q9NRY5 505 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 GRHL1Q9NZI5 618 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 DKK4Q9UBT3 224 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 ZC3H7BQ9UGR2 993 aaKnown RBP13.3□□□□□ -0.28
RPAIN-205ENST00000536255 ZMIZ1Q9ULJ6 1067 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 DNAJC16Q9Y2G8 782 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 PCDHB1Q9Y5F3 818 aa13.3□□□□□ -0.28
RPAIN-205ENST00000536255 USP24Q9UPU5 2620 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 ZCWPW2A0A1B0GU75 182 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 C17orf113A0A1B0GUU1 675 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 MGAT4DA6NG13 374 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 E7ESA3 106 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 PRMT5O14744 637 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-205ENST00000536255 BANF1O75531 89 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 FTH1P02794 183 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 DEKP35659 375 aaKnown RBP13.29□□□□□ -0.28
RPAIN-205ENST00000536255 ELK3P41970 407 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 ARCN1P48444 511 aaKnown RBP13.29□□□□□ -0.28
RPAIN-205ENST00000536255 CCL7P80098 99 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 CYP4F3Q08477 520 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 DMPKQ09013 629 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 CBLBQ13191 982 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 CRYMQ14894 314 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 RTP5Q14D33 572 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 ZNF449Q6P9G9 518 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 CEP128Q6ZU80 1094 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 ZNF438Q7Z4V0 828 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 SPRED1Q7Z699 444 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 C11orf96Q7Z7L8 435 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 LRRC6Q86X45 466 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 AGGF1Q8N302 714 aaeCLIP13.29□□□□□ -0.28
RPAIN-205ENST00000536255 ARL14Q8N4G2 192 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 BEND7Q8N7W2 519 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-205ENST00000536255 Q8N9G6 341 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-205ENST00000536255 OR2L2Q8NH16 312 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 GFM1Q96RP9 751 aaKnown RBP13.29□□□□□ -0.28
RPAIN-205ENST00000536255 FAM167BQ9BTA0 163 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 STN1Q9H668 368 aaKnown RBP13.29□□□□□ -0.28
RPAIN-205ENST00000536255 L2HGDHQ9H9P8 463 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 C20orf96Q9NUD7 363 aaPredicted RBP13.29□□□□□ -0.28
RPAIN-205ENST00000536255 TBC1D29Q9UFV1 150 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 CHMP2BQ9UQN3 213 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 TEX264Q9Y6I9 313 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 ASXL3Q9C0F0 2248 aa13.29□□□□□ -0.28
RPAIN-205ENST00000536255 BPTFQ12830 3046 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 KIR2DS5A0A0G2JLQ3 304 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 A0A0G2JNG1 304 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 A0A1W2PQM1 296 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 RHPN2P1A8MT19 583 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 PDZK1P1A8MUH7 402 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 D6RAR5 112 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 GOLGA8KD6RF30 607 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 GOLGA8TH3BQL2 631 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 KIR2DS3K7RE56 304 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 ZW10O43264 779 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 SNX2O60749 519 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 EML2O95834 649 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 F3P13726 295 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 PBLDP30039 288 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-205ENST00000536255 HALP42357 657 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 PDX1P52945 283 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 KIR2DS5Q14953 304 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 NR1D2Q14995 579 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 TYSND1Q2T9J0 566 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 ZNF470Q6ECI4 717 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 WASH2PQ6VEQ5 465 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 KCNMB4Q86W47 210 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 PROSER1Q86XN7 944 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 CILP2Q8IUL8 1156 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 ZBED8Q8IZ13 594 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 SFRP1Q8N474 314 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 CLDN19Q8N6F1 224 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 FBXO36Q8NEA4 188 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 FBXO25Q8TCJ0 367 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 HM13Q8TCT9 377 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 PYROXD1Q8WU10 500 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 GRAMD1AQ96CP6 724 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 CFAP36Q96G28 342 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 PWWP2AQ96N64 755 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 TRIM56Q9BRZ2 755 aaKnown RBP13.28□□□□□ -0.28
RPAIN-205ENST00000536255 CCM2Q9BSQ5 444 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 TSPYL1Q9H0U9 437 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 LRRN3Q9H3W5 708 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 EPB41L5Q9HCM4 733 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 WASH6PQ9NQA3 447 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 INTS10Q9NVR2 710 aaKnown RBP13.28□□□□□ -0.28
RPAIN-205ENST00000536255 MARCH4Q9P2E8 410 aaPredicted RBP13.28□□□□□ -0.28
RPAIN-205ENST00000536255 MTRF1LQ9UGC7 380 aaKnown RBP13.28□□□□□ -0.28
RPAIN-205ENST00000536255 SLC23A2Q9UGH3 650 aa13.28□□□□□ -0.28
RPAIN-205ENST00000536255 GNPTGQ9UJJ9 305 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms