RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CTSCP53634 463 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 DRG2P55039 364 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 WNT3AP56704 352 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 TPM4P67936 248 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 TRIM14Q14142 442 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 NFKBIBQ15653 356 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 SLC1A5Q15758 541 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 LONRF2Q1L5Z9 754 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 ZNF789Q5FWF6 425 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 C16orf46Q6P387 395 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 CRTC3Q6UUV7 619 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 RANBP10Q6VN20 620 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 TRAPPC5Q8IUR0 188 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 LURAP1LQ8IV03 231 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 RHOT1Q8IXI2 618 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 SIDT2Q8NBJ9 832 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 OR2L2Q8NH16 312 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 NACC2Q96BF6 587 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 BARD1Q99728 777 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 MAK16Q9BXY0 300 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 NLNQ9BYT8 704 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 ARNT2Q9HBZ2 717 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 KCND1Q9NSA2 647 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 SLC24A2Q9UI40 661 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 LNPEPQ9UIQ6 1025 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 TRHDEQ9UKU6 1024 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 FARSAQ9Y285 508 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 EFR3BQ9Y2G0 817 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 HEY1Q9Y5J3 304 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 CELSR2Q9HCU4 2923 aa10.95□□□□□ -0.66
CLSTN3-206ENST00000535668 IGLV3-16A0A075B6K0 115 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 GLYATL1P3A0A0U1RQE8 302 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 HACD1B0YJ81 288 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 SGTAO43765 313 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 MTX2O75431 263 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 GSTM1P09488 218 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 PIRTP0C851 137 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 PSMA3P25788 255 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 CD151P48509 253 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 SOX8P57073 446 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 RPS15P62841 145 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 GSTM4Q03013 218 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 XRCC4Q13426 336 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 GTF2H3Q13889 308 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 SIRPB2Q5JXA9 342 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 PLEKHS1Q5SXH7 462 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 GPRC6AQ5T6X5 926 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 ALS2CLQ60I27 953 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 IRGCQ6NXR0 463 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 IGFL3Q6UXB1 125 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 FAM83HQ6ZRV2 1179 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 DSELQ8IZU8 1212 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 TMEM102Q8N9M5 508 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 SLC38A9Q8NBW4 561 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 GPR150Q8NGU9 434 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 LRRN4Q8WUT4 740 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 HEXDCQ8WVB3 486 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 TFB1MQ8WVM0 346 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 OXNAD1Q96HP4 312 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 TTC25Q96NG3 672 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 IP6K3Q96PC2 410 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 SMAD5Q99717 465 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 MAP3K3Q99759 626 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 CCM2Q9BSQ5 444 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 TRIM55Q9BYV6 548 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 TFB2MQ9H5Q4 396 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 AKIRIN1Q9H9L7 192 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 ARFGAP3Q9NP61 516 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 C1GALT1Q9NS00 363 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 C5AR2Q9P296 337 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 DNAJC16Q9Y2G8 782 aa10.94□□□□□ -0.66
CLSTN3-206ENST00000535668 ANKRD12Q6UB98 2062 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 CDC14CA4D256 554 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 C5orf60A6NFR6 353 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 H3BMH7 237 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 PSTPIP1O43586 416 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 ZNF189O75820 626 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 DDAH2O95865 285 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 TPM3P06753 285 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 ADRA1AP35348 466 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 HADHAP40939 763 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 PPP1CAP62136 330 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 XIAPP98170 497 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 PDE1BQ01064 536 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 MESDQ14696 234 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 CHRNA6Q15825 494 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 DNTTIP2Q5QJE6 756 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 ZNF385CQ66K41 422 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 MFSD7Q6UXD7 560 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 FAM92BQ6ZTR7 304 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 MED25Q71SY5 747 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 TMEM135Q86UB9 458 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 LUZP1Q86V48 1076 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 OOSP2Q86WS3 158 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 DHRS4Q9BTZ2 278 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 ING2Q9H160 280 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 HRASLS2Q9NWW9 162 aa10.93□□□□□ -0.66
CLSTN3-206ENST00000535668 POMT2Q9UKY4 750 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms