RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 AVL9Q8NBF6 648 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 SH3KBP1Q96B97 665 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 STAMBPL1Q96FJ0 436 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 SLC38A3Q99624 504 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 STN1Q9H668 368 aaKnown RBP22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 VPS37BQ9H9H4 285 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 FAM8A1Q9UBU6 413 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 PSMD13Q9UNM6 376 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 PCDHB1Q9Y5F3 818 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 RPS6KL1Q9Y6S9 549 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 TPRP12270 2363 aaKnown RBP22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 IGHV1OR21-1A0A087WYE8 117 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 PRAMEF33A0A0G2JMD5 474 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 QSOX1O00391 747 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 BANF1O75531 89 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 USP1O94782 785 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 GSTM1P09488 218 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 HALP42357 657 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 TTPAP49638 278 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 GSTM4Q03013 218 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 RPE65Q16518 533 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 AMZ1Q400G9 498 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 TMPRSS9Q7Z410 1059 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 GPR150Q8NGU9 434 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 ERP44Q9BS26 406 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 WWP1Q9H0M0 922 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 COG4Q9H9E3 785 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 UCK1Q9HA47 277 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 POT1Q9NUX5 634 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 KCNK4Q9NYG8 393 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 IL1RAPL1Q9NZN1 696 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 ENTPD2Q9Y5L3 495 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 AKAP13Q12802 2813 aa22.26■■□□□ 1.15
SFSWAP-204ENST00000535399 ZW10O43264 779 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 VIPP01282 170 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 POLBP06746 335 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 SQSTM1Q13501 440 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 TYSND1Q2T9J0 566 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 BBS9Q3SYG4 887 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 NKAIN2Q5VXU1 208 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 MRNIPQ6NTE8 343 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 NEPROQ6NW34 567 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 B3GNT8Q7Z7M8 397 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 IGDCC3Q8IVU1 814 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 TRIM48Q8IWZ4 208 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 SPDYE1Q8NFV5 336 aaPredicted RBP22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 CXorf40BQ96DE9 158 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 INSM2Q96T92 566 aaPredicted RBP22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 EBNA1BP2Q99848 306 aaKnown RBP22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 SLC40A1Q9NP59 571 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 MRFAP1Q9Y605 127 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 ACACBO00763 2458 aa22.25■■□□□ 1.15
SFSWAP-204ENST00000535399 COL27A1Q8IZC6 1860 aaPredicted RBP22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 TRABD2BA6NFA1 517 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 LILRA5A6NI73 299 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 PRMT5O14744 637 aaPredicted RBP22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 FTH1P02794 183 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 OR56A5P0C7T3 313 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 PGAM1P18669 254 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 CFHR1Q03591 330 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 CLPPQ16740 277 aaPredicted RBP22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 DUPD1Q68J44 220 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 CAPRIN2Q6IMN6 1127 aaKnown RBP22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 TMEM26Q6ZUK4 368 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 USP53Q70EK8 1073 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 SDCCAG8Q86SQ7 713 aaPredicted RBP22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 PDIK1LQ8N165 341 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 OTUD6BQ8N6M0 293 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 GRAMD1AQ96CP6 724 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 RMDN2Q96LZ7 410 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 NUDT22Q9BRQ3 303 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 WDR83Q9BRX9 315 aaKnown RBP22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 P2RY12Q9H244 342 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 CFAP20Q9Y6A4 193 aaKnown RBP22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 FAM169AQ9Y6X4 670 aa22.24■■□□□ 1.15
SFSWAP-204ENST00000535399 C1QTNF9BB2RNN3 333 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 NDUFS3O75489 264 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 CPNE6O95741 557 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 SLC35G4P0C7Q5 338 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 C1QTNF9P0C862 333 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 MTHFD1P11586 935 aaKnown RBP22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 OGNP20774 298 aaKnown RBP22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 CSF2RBP32927 897 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 EPHA4P54764 986 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 GPLD1P80108 840 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 ZFP36L1Q07352 338 aaKnown RBP22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 RPA4Q13156 261 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 UNQ6494/PRO21346Q6UXR6 183 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 CILP2Q8IUL8 1156 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 RBM12BQ8IXT5 1001 aaKnown RBP22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 BBOF1Q8ND07 529 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 LKAAEAR1Q8TD35 194 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 ATXN7L3BQ96GX2 97 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 TCF12Q99081 682 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 TBC1D10AQ9BXI6 508 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 FOXP3Q9BZS1 431 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 OR52A5Q9H2C5 316 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 DPH5Q9H2P9 285 aa22.23■■□□□ 1.15
SFSWAP-204ENST00000535399 RDH14Q9HBH5 336 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms