RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 EIF2S3LQ2VIR3 472 aaKnown RBP12.5□□□□□ -0.41
SPG11-203ENST00000535302 PPP1R15BQ5SWA1 713 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 CAPN13Q6MZZ7 669 aaPredicted RBP12.5□□□□□ -0.41
SPG11-203ENST00000535302 CHSY3Q70JA7 882 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 LINGO2Q7L985 606 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 OR8H3Q8N146 312 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 LSM14AQ8ND56 463 aaKnown RBP12.5□□□□□ -0.41
SPG11-203ENST00000535302 TWIST2Q8WVJ9 160 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 SLC25A36Q96CQ1 311 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 CIB1Q99828 191 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 ARHGAP23Q9P227 1491 aa12.5□□□□□ -0.41
SPG11-203ENST00000535302 H3BNH8 94 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 ATG13O75143 517 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 CBLP22681 906 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 IL12BP29460 328 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 TSPAN5P62079 268 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 ZNF627Q7L945 461 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 PSMG2Q969U7 264 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 TRIM43Q96BQ3 446 aaPredicted RBP12.49□□□□□ -0.41
SPG11-203ENST00000535302 SNTG1Q9NSN8 517 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 TMCO1Q9UM00 188 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 MYBPHLA2RUH7 354 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 OAZ2O95190 189 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 VIPP01282 170 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 IDO1P14902 403 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 ZNF16P17020 682 aaPredicted RBP12.49□□□□□ -0.41
SPG11-203ENST00000535302 ATF4P18848 351 aaPredicted RBP12.49□□□□□ -0.41
SPG11-203ENST00000535302 PRKCZQ05513 592 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 SPATC1Q76KD6 591 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 SCAMP5Q8TAC9 235 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 DQX1Q8TE96 717 aaKnown RBP12.49□□□□□ -0.41
SPG11-203ENST00000535302 METTL21AQ8WXB1 218 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 UPF1Q92900 1129 aaKnown RBP eCLIP12.49□□□□□ -0.41
SPG11-203ENST00000535302 ADGRB1O14514 1584 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 CDH5P33151 784 aaPredicted RBP12.49□□□□□ -0.41
SPG11-203ENST00000535302 CAPGP40121 348 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 BRMS1LQ5PSV4 323 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 FUT10Q6P4F1 479 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 SLC24A5Q71RS6 500 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 IQCHQ86VS3 1027 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 TFAP2BQ92481 460 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 AGAP2Q99490 1192 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 NR2E1Q9Y466 385 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 MAP2K7O14733 419 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 CHP2O43745 196 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 C2P06681 752 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 BPGMP07738 259 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 ITGA2P17301 1181 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 DRG2P55039 364 aaKnown RBP12.49□□□□□ -0.41
SPG11-203ENST00000535302 CRYBG2Q8N1P7 616 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 RASGEF1AQ8N9B8 481 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 OR8H1Q8NGG4 311 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 TNFAIP8L1Q8WVP5 186 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 EXD2Q9NVH0 621 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 ELOVL2Q9NXB9 296 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 RGS17Q9UGC6 210 aaPredicted RBP12.49□□□□□ -0.41
SPG11-203ENST00000535302 CPQQ9Y646 472 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 E7ENX8 843 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 H7C0S8 307 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 KMOO15229 486 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 NOBOXO60393 691 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 CLDN11O75508 207 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 SERPINB7O75635 380 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 CDH3P22223 829 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 PTPN9P43378 593 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 BEND4Q6ZU67 534 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 MON1BQ7L1V2 547 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 PLD5Q8N7P1 536 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 SPATA9Q9BWV2 254 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 TESMINQ9Y4I5 508 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 IFNGP01579 166 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 ABHD2P08910 425 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 KCNJ5P48544 419 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 POLR2JP52435 117 aaKnown RBP12.49□□□□□ -0.41
SPG11-203ENST00000535302 ATP6V0D1P61421 351 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 SLC13A2Q13183 592 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 AKAP14Q86UN6 197 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 GAS2L1Q99501 681 aaPredicted RBP12.49□□□□□ -0.41
SPG11-203ENST00000535302 GORASP1Q9BQQ3 440 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 SLC39A8Q9C0K1 460 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 IPPKQ9H8X2 491 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 MGAT4AQ9UM21 535 aa12.49□□□□□ -0.41
SPG11-203ENST00000535302 HYKKA2RU49 373 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 SMIM30A4D0T7 59 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 SOWAHBA6NEL2 793 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 GPR89AB7ZAQ6 455 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 ALOX15BO15296 676 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 GPR89BP0CG08 455 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 TNFRSF8P28908 595 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 SCNN1AP37088 669 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 SPAM1P38567 509 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 LSM12Q3MHD2 195 aaKnown RBP12.48□□□□□ -0.41
SPG11-203ENST00000535302 TBC1D25Q3MII6 688 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 SPDYCQ5MJ68 293 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 AHSA2Q719I0 299 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 ZNF567Q8N184 647 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 OR10H4Q8NGA5 316 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 ZNF285Q96NJ3 590 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 CORO2BQ9UQ03 480 aa12.48□□□□□ -0.41
SPG11-203ENST00000535302 ERVK-11Q9UQG0 969 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms