RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 UGT1A4P22310 534 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 RPL10P27635 214 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 ZNF75DP51815 510 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 CTSCP53634 463 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 GFERP55789 205 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 OTUD4Q01804 1114 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 PLA2G4EQ3MJ16 856 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 SNAP47Q5SQN1 464 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 LDLRAP1Q5SW96 308 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 ATP1A1-AS1Q5TC04 95 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 CEACAM20Q6UY09 585 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 RAD9BQ6WBX8 426 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 TIPARPQ7Z3E1 657 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 GLT6D1Q7Z4J2 308 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 FAM129CQ86XR2 697 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 TMTC1Q8IUR5 882 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 CCDC50Q8IVM0 306 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 RBM12BQ8IXT5 1001 aaKnown RBP9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 RASGEF1AQ8N9B8 481 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 LRRC57Q8N9N7 239 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 ACTL9Q8TC94 416 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 C19orf43Q9BQ61 176 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 EFHD1Q9BUP0 239 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 LACRTQ9GZZ8 138 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 RAB33BQ9H082 229 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 OSGEPL1Q9H4B0 414 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 UGT1A7Q9HAW7 530 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 UGT1A10Q9HAW8 530 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 UGT1A8Q9HAW9 530 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 EPHA6Q9UF33 1036 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 RSPH14Q9UHP6 348 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 DNAJC16Q9Y2G8 782 aa9.87□□□□□ -0.83
CLSTN3-203ENST00000534830 HIVEP3Q5T1R4 2406 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 GLYATL1P3A0A0U1RQE8 302 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 LOC101059948A0A1B0GTJ6 334 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 CCDC66A2RUB6 948 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 OR52A4PA6NMU1 304 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 F5H423 210 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 H7C0C1 242 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 POP7O75817 140 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 TCN2P20062 427 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 IDSP22304 550 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 MAP4P27816 1152 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 ATP5OP48047 213 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 DRG2P55039 364 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 GEMP55040 296 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 XIAPP98170 497 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 MC1RQ01726 317 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 ABHD18Q0P651 414 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 ITGA9Q13797 1035 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 MAP7Q14244 749 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 PTPRCAPQ14761 206 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 TAF1AQ15573 450 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 SEPT7Q16181 437 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 ANKRD20A2Q5SQ80 823 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 GPRC6AQ5T6X5 926 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 ANKRD20A1Q5TYW2 823 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 ANKRD20A3Q5VUR7 823 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 DENND5AQ6IQ26 1287 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 TCTN3Q6NUS6 607 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 TMEM220Q6QAJ8 160 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 FAM151BQ6UXP7 276 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 PRSS42Q7Z5A4 293 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 TMEM139Q8IV31 216 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 NLGN4XQ8N0W4 816 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 IPMKQ8NFU5 416 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 NLGN4YQ8NFZ3 816 aaPredicted RBP9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 BLOC1S5Q8TDH9 187 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 STARD8Q92502 1023 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 ALG3Q92685 438 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 CTRCQ99895 268 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 OSBPL8Q9BZF1 889 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 RBSNQ9H1K0 784 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 ARNT2Q9HBZ2 717 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 LUC7LQ9NQ29 371 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 PKP3Q9Y446 797 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 ARL5AQ9Y689 179 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 KCNMB2Q9Y691 235 aa9.86□□□□□ -0.83
CLSTN3-203ENST00000534830 SHANK1Q9Y566 2161 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 F8P00451 2351 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 GRID2IPA4D2P6 1211 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 GOLGA6L3A6NEY3 463 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 C5orf60A6NFR6 353 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 BUD23O43709 281 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 SGTAO43765 313 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 ANXA9O76027 345 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 RBP3P10745 1247 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 PYGMP11217 842 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 TYRP1P17643 537 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 AMD1P17707 334 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 LPOP22079 712 aaPredicted RBP9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 PSMB4P28070 264 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 MAPK9P45984 424 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 CAPZBP47756 277 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 LEPRP48357 1165 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 RWDD2BP57060 319 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 OLIG2Q13516 323 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 GTF2H3Q13889 308 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 GPR18Q14330 331 aa9.85□□□□□ -0.83
CLSTN3-203ENST00000534830 RPE65Q16518 533 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms