RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 ARHGAP25P42331 645 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 CCL11P51671 97 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 WNT3AP56704 352 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 DYNLT1P63172 113 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 CHAF1BQ13112 559 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 IL10RAQ13651 578 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 PRKD1Q15139 912 aaPredicted RBP13.56□□□□□ -0.24
CCDC84-208ENST00000534656 PPP2R5EQ16537 467 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 ASTE1Q2TB18 679 aaPredicted RBP13.56□□□□□ -0.24
CCDC84-208ENST00000534656 NADK2Q4G0N4 442 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 SIRPB2Q5JXA9 342 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 LRRC38Q5VT99 294 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 IZUMO3Q5VZ72 239 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 PAPD7Q5XG87 772 aaKnown RBP13.56□□□□□ -0.24
CCDC84-208ENST00000534656 METRNLQ641Q3 311 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 HIST2H2BCQ6DN03 193 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 KDELC1Q6UW63 502 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 FAM151BQ6UXP7 276 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 ZNF517Q6ZMY9 492 aaPredicted RBP13.56□□□□□ -0.24
CCDC84-208ENST00000534656 BZW1Q7L1Q6 419 aaKnown RBP13.56□□□□□ -0.24
CCDC84-208ENST00000534656 TMEM126BQ8IUX1 230 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 OR8K5Q8NH50 307 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 ZFPM2Q8WW38 1151 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 RNF25Q96BH1 459 aaPredicted RBP13.56□□□□□ -0.24
CCDC84-208ENST00000534656 ZNF501Q96CX3 271 aaPredicted RBP13.56□□□□□ -0.24
CCDC84-208ENST00000534656 ING2Q9H160 280 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 IMP3Q9NV31 184 aaKnown RBP13.56□□□□□ -0.24
CCDC84-208ENST00000534656 HACD3Q9P035 362 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 PLEKHB1Q9UF11 243 aaPredicted RBP13.56□□□□□ -0.24
CCDC84-208ENST00000534656 MAP4K5Q9Y4K4 846 aa13.56□□□□□ -0.24
CCDC84-208ENST00000534656 CFAP20Q9Y6A4 193 aaKnown RBP13.56□□□□□ -0.24
CCDC84-208ENST00000534656 UTP20O75691 2785 aaKnown RBP13.55□□□□□ -0.24
CCDC84-208ENST00000534656 GLYATL1P3A0A0U1RQE8 302 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 SORBS2O94875 1100 aaKnown RBP13.55□□□□□ -0.24
CCDC84-208ENST00000534656 ZBTB11O95625 1053 aaPredicted RBP13.55□□□□□ -0.24
CCDC84-208ENST00000534656 NFKB1P19838 968 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 CHRNA4P43681 627 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 NR2C2P49116 596 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 WASHC5Q12768 1159 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 GPS2Q13227 327 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 XRCC4Q13426 336 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 ITGA9Q13797 1035 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 GPR19Q15760 415 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 ODF2Q5BJF6 829 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 TMTC4Q5T4D3 741 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 GPRC6AQ5T6X5 926 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 OOSP2Q86WS3 158 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 CARFQ8N187 725 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 SLC25A41Q8N5S1 370 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 SLC38A9Q8NBW4 561 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 TFB1MQ8WVM0 346 aaKnown RBP13.55□□□□□ -0.24
CCDC84-208ENST00000534656 MR1Q95460 341 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 MRGPRX2Q96LB1 330 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 INSM2Q96T92 566 aaPredicted RBP13.55□□□□□ -0.24
CCDC84-208ENST00000534656 LATS2Q9NRM7 1088 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 DDX56Q9NY93 547 aaKnown RBP13.55□□□□□ -0.24
CCDC84-208ENST00000534656 PCDHGB7Q9Y5F8 929 aa13.55□□□□□ -0.24
CCDC84-208ENST00000534656 USP9YO00507 2555 aaPredicted RBP13.54□□□□□ -0.24
CCDC84-208ENST00000534656 OR6C74A6NCV1 312 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 MGAT4DA6NG13 374 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 GAPDHSO14556 408 aaPredicted RBP13.54□□□□□ -0.24
CCDC84-208ENST00000534656 BUD23O43709 281 aaKnown RBP13.54□□□□□ -0.24
CCDC84-208ENST00000534656 CEACAM4O75871 244 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 KLK3P07288 261 aaPredicted RBP13.54□□□□□ -0.24
CCDC84-208ENST00000534656 RAB40ALP0C0E4 278 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 MSH3P20585 1137 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 PBLDP30039 288 aaPredicted RBP13.54□□□□□ -0.24
CCDC84-208ENST00000534656 PTGIRP43119 386 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 TNNT3P45378 269 aaPredicted RBP13.54□□□□□ -0.24
CCDC84-208ENST00000534656 GSDMDP57764 484 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 SLC1A5Q15758 541 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 LONRF2Q1L5Z9 754 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 FNBP1LQ5T0N5 605 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 ARMC6Q6NXE6 501 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 MFSD7Q6UXD7 560 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 GLT6D1Q7Z4J2 308 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 RHOT1Q8IXI2 618 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 BEND7Q8N7W2 519 aaPredicted RBP13.54□□□□□ -0.24
CCDC84-208ENST00000534656 BLOC1S5Q8TDH9 187 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 ADAMTS17Q8TE56 1095 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 SSC4DQ8WTU2 575 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 C12orf66Q96MD2 445 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 LRFN5Q96NI6 719 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 FCRL5Q96RD9 977 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 WWP1Q9H0M0 922 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 CHST8Q9H2A9 424 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 DEF6Q9H4E7 631 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 KIR3DX1Q9H7L2 352 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 SMOXQ9NWM0 555 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 IFNKQ9P0W0 207 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 SAE1Q9UBE0 346 aaPredicted RBP13.54□□□□□ -0.24
CCDC84-208ENST00000534656 SLC24A2Q9UI40 661 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 ACSL5Q9ULC5 683 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 BTRCQ9Y297 605 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 PKP3Q9Y446 797 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 ZNF451Q9Y4E5 1061 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.54□□□□□ -0.246e-6■□□□□ 8.1
CCDC84-208ENST00000534656 NBASA2RRP1 2371 aa13.54□□□□□ -0.24
CCDC84-208ENST00000534656 TNRC6AQ8NDV7 1962 aaKnown RBP13.53□□□□□ -0.24
CCDC84-208ENST00000534656 SSU72P8A0A1W2PR75 194 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms