RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 SLC38A3Q99624 504 aa20.93■□□□□ 0.94
PKP3-211ENST00000534401 FOXP3Q9BZS1 431 aa20.93■□□□□ 0.94
PKP3-211ENST00000534401 STRADBQ9C0K7 418 aa20.93■□□□□ 0.94
PKP3-211ENST00000534401 SEMA6CQ9H3T2 930 aa20.93■□□□□ 0.94
PKP3-211ENST00000534401 RDH14Q9HBH5 336 aa20.93■□□□□ 0.94
PKP3-211ENST00000534401 AK5Q9Y6K8 562 aa20.93■□□□□ 0.94
PKP3-211ENST00000534401 IGHV5-10-1A0A0J9YXX1 117 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 PMS2P1A4D2B8 440 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 CTAGE9A4FU28 777 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 OR52A4PA6NMU1 304 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 CDRT15L2A8MXV6 281 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 TLX3O43711 291 aaPredicted RBP20.92■□□□□ 0.94
PKP3-211ENST00000534401 IVDP26440 423 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 VPS41P49754 854 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 DRG2P55039 364 aaKnown RBP20.92■□□□□ 0.94
PKP3-211ENST00000534401 CRADDP78560 199 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 BIRC2Q13490 618 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 RPE65Q16518 533 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 NKAIN2Q5VXU1 208 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 CLEC14AQ86T13 490 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 ZNF761Q86XN6 746 aaPredicted RBP20.92■□□□□ 0.94
PKP3-211ENST00000534401 NAT8LQ8N9F0 302 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 OR10G6Q8NH81 332 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 SYNDIG1Q9H7V2 258 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 OGFRQ9NZT2 677 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 RNF14Q9UBS8 474 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 SOX13Q9UN79 622 aa20.92■□□□□ 0.94
PKP3-211ENST00000534401 PLD2O14939 933 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 HGSO14964 777 aaPredicted RBP20.91■□□□□ 0.94
PKP3-211ENST00000534401 VIPP01282 170 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 THRAP10827 490 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 MGAT1P26572 445 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 ARNTP27540 789 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 SARNPP82979 210 aaKnown RBP20.91■□□□□ 0.94
PKP3-211ENST00000534401 C3orf38Q5JPI3 329 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 RAB11FIP2Q7L804 512 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 CLDN19Q8N6F1 224 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 ZFPM2Q8WW38 1151 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 FGF11Q92914 225 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 CCM2Q9BSQ5 444 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 DDX47Q9H0S4 455 aaKnown RBP20.91■□□□□ 0.94
PKP3-211ENST00000534401 XAB2Q9HCS7 855 aaKnown RBP20.91■□□□□ 0.94
PKP3-211ENST00000534401 SYBUQ9NX95 663 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 PRSS21Q9Y6M0 314 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 CFAP47Q6ZTR5 3102 aa20.91■□□□□ 0.94
PKP3-211ENST00000534401 A0A087WV48 116 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 PRAMEF33A0A0G2JMD5 474 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 QSOX1O00391 747 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 DUX1O43812 170 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 NMBRP28336 390 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 HALP42357 657 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 RPA4Q13156 261 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 PTK6Q13882 451 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 SEMA3AQ14563 771 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 C16orf72Q14CZ0 275 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 SEPT7Q16181 437 aaKnown RBP20.9■□□□□ 0.94
PKP3-211ENST00000534401 MAP9Q49MG5 647 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 RNASEH2BQ5TBB1 312 aaKnown RBP20.9■□□□□ 0.94
PKP3-211ENST00000534401 ARHGAP22Q7Z5H3 698 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 LILRA3Q8N6C8 439 aaPredicted RBP20.9■□□□□ 0.94
PKP3-211ENST00000534401 INSM2Q96T92 566 aaPredicted RBP20.9■□□□□ 0.94
PKP3-211ENST00000534401 TBC1D10AQ9BXI6 508 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 B3GNT4Q9C0J1 378 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 OR52A5Q9H2C5 316 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 EPB41L5Q9HCM4 733 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 TMEM9Q9P0T7 183 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 RAXQ9Y2V3 346 aa20.9■□□□□ 0.94
PKP3-211ENST00000534401 CELSR3Q9NYQ7 3312 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 MN1Q10571 1320 aaPredicted RBP20.89■□□□□ 0.93
PKP3-211ENST00000534401 AVILO75366 819 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 C9P02748 559 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 ITGA2BP08514 1039 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 MTHFD1P11586 935 aaKnown RBP20.89■□□□□ 0.93
PKP3-211ENST00000534401 ARCN1P48444 511 aaKnown RBP20.89■□□□□ 0.93
PKP3-211ENST00000534401 PRAMEP78395 509 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 FBXO39Q8N4B4 442 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 OR6P1Q8NGX9 317 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.89■□□□□ 0.93
PKP3-211ENST00000534401 SERPINB12Q96P63 405 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 RAB33BQ9H082 229 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 WWP1Q9H0M0 922 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 COG4Q9H9E3 785 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 MARCH4Q9P2E8 410 aaPredicted RBP20.89■□□□□ 0.93
PKP3-211ENST00000534401 EPHA6Q9UF33 1036 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 ACSL6Q9UKU0 697 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 PCDHGA7Q9Y5G6 932 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 PTPRQQ9UMZ3 2332 aa20.89■□□□□ 0.93
PKP3-211ENST00000534401 MAGEB16A2A368 324 aa20.88■□□□□ 0.93
PKP3-211ENST00000534401 PBLDP30039 288 aaPredicted RBP20.88■□□□□ 0.93
PKP3-211ENST00000534401 EIF2S3P41091 472 aaKnown RBP20.88■□□□□ 0.93
PKP3-211ENST00000534401 CD151P48509 253 aa20.88■□□□□ 0.93
PKP3-211ENST00000534401 ETF1P62495 437 aaKnown RBP20.88■□□□□ 0.93
PKP3-211ENST00000534401 GPR18Q14330 331 aa20.88■□□□□ 0.93
PKP3-211ENST00000534401 KIAA0930Q6ICG6 404 aaPredicted RBP20.88■□□□□ 0.93
PKP3-211ENST00000534401 SYDE1Q6ZW31 735 aaPredicted RBP20.88■□□□□ 0.93
PKP3-211ENST00000534401 TMEM135Q86UB9 458 aa20.88■□□□□ 0.93
PKP3-211ENST00000534401 TRIM48Q8IWZ4 208 aa20.88■□□□□ 0.93
PKP3-211ENST00000534401 PPIL6Q8IXY8 311 aa20.88■□□□□ 0.93
PKP3-211ENST00000534401 CFAP206Q8IYR0 622 aa20.88■□□□□ 0.93
PKP3-211ENST00000534401 AGGF1Q8N302 714 aaeCLIP20.88■□□□□ 0.931e-6■■■■□ 19.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms