RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 PDE10AQ9Y233 779 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 IGKV6D-41A0A0C4DH26 115 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 PSMD11O00231 422 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 DNM1LO00429 736 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 MAGEB3O15480 346 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 PIGRP01833 764 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 GJB1P08034 283 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 RAP2AP10114 183 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 ACADLP28330 430 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 CORO1AP31146 461 aaKnown RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 OR1D2P34982 312 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 CTNNB1P35222 781 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 PTPN5P54829 565 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 DAOAP59103 153 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 SP3Q02447 781 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 SNAPC1Q16533 368 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 NDUFA9Q16795 377 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 PPM1JQ5JR12 505 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 PTF1AQ7RTS3 328 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 TMPRSS11BQ86T26 416 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 ZNF781Q8N8C0 355 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 DCAKDQ8WVC6 231 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 DPF3Q92784 378 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 MFSD3Q96ES6 412 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 CXorf21Q9HAI6 301 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 SIX2Q9NPC8 291 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 THUMPD1Q9NXG2 353 aaKnown RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 DNAJB9Q9UBS3 223 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 RUVBL1Q9Y265 456 aaKnown RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 DHRS7Q9Y394 339 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 FAM234BA2RU67 622 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 A8MUI8 341 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 MSI1O43347 362 aaKnown RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 PLOD3O60568 738 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 CCNB2O95067 398 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 DNTTP04053 509 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 IDSP22304 550 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 TIE1P35590 1138 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 ZNF132P52740 706 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 EEFSECP57772 596 aaKnown RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 MPP1Q00013 466 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 C2orf80Q0P641 193 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 IL18R1Q13478 541 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 ASTE1Q2TB18 679 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 SPATS1Q496A3 300 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 ZFP69Q49AA0 526 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 C6orf52Q5T4I8 152 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 SDHAF4Q5VUM1 108 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 SAPCD2Q86UD0 394 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 CYP4X1Q8N118 509 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 MTMR14Q8NCE2 650 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 OR5K1Q8NHB7 308 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 LRRN4Q8WUT4 740 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 FEM1CQ96JP0 617 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 FCRL5Q96RD9 977 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 MCMBPQ9BTE3 642 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 FAM83DQ9H4H8 585 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 KAT8Q9H7Z6 458 aaKnown RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 C1orf109Q9NX04 203 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 CFAP97Q9P2B7 532 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 ZNF282Q9UDV7 671 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 POMPQ9Y244 141 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 PCDHGA11Q9Y5H2 935 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 COLEC10Q9Y6Z7 277 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 GRIN2DO15399 1336 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 PTPRJQ12913 1337 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 KLF11O14901 512 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 CCNKO75909 580 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 CDK14O94921 469 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 PRAMEF1O95521 474 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 POP4O95707 220 aaKnown RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 SRPRAP08240 638 aaKnown RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 LAMP2P13473 410 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 ITPKAP23677 461 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 SLC7A1P30825 629 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 HNF4AP41235 474 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 HCAR3P49019 387 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 RAB2AP61019 212 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 LCN1P1Q5VSP4 162 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 EGFLAMQ63HQ2 1017 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 KIAA1324Q6UXG2 1013 aaKnown RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 TMEM192Q8IY95 271 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 FSTL5Q8N475 847 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 OR10H5Q8NGA6 315 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 SLC35B2Q8TB61 432 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 C10orf82Q8WW14 230 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 RAD51AP1Q96B01 352 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 TMCO6Q96DC7 493 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 FUBP3Q96I24 572 aaKnown RBP eCLIP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 ZNF599Q96NL3 588 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 HAPLN3Q96S86 360 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 TCF25Q9BQ70 676 aa6.93□□□□□ -1.3
CTNND1-236ENST00000533667 CCDC177Q9NQR7 707 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 FARSBQ9NSD9 589 aaKnown RBP6.93□□□□□ -1.3
CTNND1-236ENST00000533667 RIIAD1A6NNX1 92 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 NFATC1O95644 943 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 ZNF806P0C7X5 589 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 TRIM23P36406 574 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 DSC2Q02487 901 aa6.92□□□□□ -1.3
CTNND1-236ENST00000533667 FSTL1Q12841 308 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms