RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 GKAP1Q5VSY0 366 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 LYPLAL1Q5VWZ2 237 aa13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 SLC23A3Q6PIS1 610 aa13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 CCDC91Q7Z6B0 441 aa13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 SPATS2Q86XZ4 545 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 ZNF547Q8IVP9 402 aa13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 BEND7Q8N7W2 519 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 LRRC8CQ8TDW0 803 aa13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 SLC13A1Q9BZW2 595 aa13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 TRIM39Q9HCM9 518 aa13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 FGF22Q9HCT0 170 aa13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 MRPL40Q9NQ50 206 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 SNX15Q9NRS6 342 aa13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 ANKRD6Q9Y2G4 727 aa13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 MTO1Q9Y2Z2 717 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-214ENST00000533632 ZFC3H1O60293 1989 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 A0A1B0GTW7 788 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 OR2AG2A6NM03 316 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 TCP11X1B4DZS4 312 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 PRMT5O14744 637 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 BCAT2O15382 392 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 BIRC5O15392 142 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 DNAJC6O75061 913 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 HOXC4P09017 264 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 THEGLP0DJG4 465 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 COL6A2P12110 1019 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 ATP1B2P14415 290 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 TAC1P20366 129 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 MSH3P20585 1137 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 RPS3P23396 243 aaKnown RBP eCLIP13.21□□□□□ -0.292e-8■■■■■ 45.7
TRAPPC4-214ENST00000533632 NSG1P42857 185 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 ADARP55265 1226 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 RACK1P63244 317 aaKnown RBP13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 IRX4P78413 519 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 DMTNQ08495 405 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 LRRC34Q8IZ02 419 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 RAB3IL1Q8TBN0 382 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 FAM136AQ96C01 138 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 FAM111AQ96PZ2 611 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 OLFM1Q99784 485 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 SLC17A7Q9P2U7 560 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 GALPQ9UBC7 116 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 SLC17A4Q9Y2C5 497 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 PRKAB1Q9Y478 270 aa13.21□□□□□ -0.29
TRAPPC4-214ENST00000533632 DCHS1Q96JQ0 3298 aa13.21□□□□□ -0.3
TRAPPC4-214ENST00000533632 TDRD6O60522 2096 aaKnown RBP13.21□□□□□ -0.3
TRAPPC4-214ENST00000533632 ASCC3Q8N3C0 2202 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 LNP1A1A4G5 178 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 CACNB4O00305 520 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 KLF11O14901 512 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 PFDN6O15212 129 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 NIPSNAP2O75323 286 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 CDK14O94921 469 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 ZNF7P17097 686 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 CD38P28907 300 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 CRABP2P29373 138 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 RABIFP47224 123 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 CSNK1EP49674 416 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 CSRP3P50461 194 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 CDKN2DP55273 166 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 POU4F1Q01851 419 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 DUOXA1Q1HG43 343 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 CCDC153Q494R4 210 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 TAF1BQ53T94 588 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 TRIM61Q5EBN2 209 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 MACC1Q6ZN28 852 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 ALYREFQ86V81 257 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 PIM3Q86V86 326 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 GPATCH11Q8N954 259 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 MFSD2AQ8NA29 543 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 OR1E3Q8WZA6 343 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 PDXPQ96GD0 296 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 AARSD1Q9BTE6 412 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 CLPBQ9H078 707 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 CAB39LQ9H9S4 337 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 TLK1Q9UKI8 766 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 VPS9D1Q9Y2B5 631 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 FAM95CA0A1B0GW59 222 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 EBAG9O00559 213 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 CHUKO15111 745 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 SCAMP1O15126 338 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 NUAK1O60285 661 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 ESR1P03372 595 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 PKMP14618 531 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 GMPRP36959 345 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 DPP6P42658 865 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 SERPINB4P48594 390 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 YPEL5P62699 121 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 FZD2Q14332 565 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 USP10Q14694 798 aaKnown RBP13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 CRTC3Q6UUV7 619 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 XKR5Q6UX68 686 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 CDHR3Q6ZTQ4 885 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 PIGWQ7Z7B1 504 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 C11orf96Q7Z7L8 435 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 ZNF75CPQ92670 426 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 TSPAN17Q96FV3 270 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 KLHDC7BQ96G42 594 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 DCUN1D1Q96GG9 259 aa13.2□□□□□ -0.3
TRAPPC4-214ENST00000533632 WDR92Q96MX6 357 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms