RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 HACD3Q9P035 362 aa22.36■■□□□ 1.17
PKP3-210ENST00000533249 CFAP20Q9Y6A4 193 aaKnown RBP22.36■■□□□ 1.17
PKP3-210ENST00000533249 MTSS1O43312 755 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 RFPL1O75677 317 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 EPOP01588 193 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 ARL4DP49703 201 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 ADCY2Q08462 1091 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 SLC1A5Q15758 541 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 TAZQ16635 292 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 PWWP2BQ6NUJ5 590 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 TCTN3Q6NUS6 607 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 CERS6Q6ZMG9 384 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 ZNF567Q8N184 647 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 TEX19Q8NA77 164 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 P3H4Q92791 437 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 FCRL5Q96RD9 977 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.35■■□□□ 1.17
PKP3-210ENST00000533249 SEMA5BQ9P283 1151 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 TLK1Q9UKI8 766 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 MAN2B2Q9Y2E5 1009 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 PKP3Q9Y446 797 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 PCDHGA6Q9Y5G7 932 aa22.35■■□□□ 1.17
PKP3-210ENST00000533249 NTRK1P04629 796 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 EBLN1P0CF75 366 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 AKT1P31749 480 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 XRCC4Q13426 336 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 ITGA9Q13797 1035 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 PTPRCAPQ14761 206 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 DNTTIP2Q5QJE6 756 aaKnown RBP22.34■■□□□ 1.17
PKP3-210ENST00000533249 FNBP1LQ5T0N5 605 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 ASB18Q6ZVZ8 466 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 DET1Q7L5Y6 550 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 BEND7Q8N7W2 519 aaPredicted RBP22.34■■□□□ 1.17
PKP3-210ENST00000533249 DTX3LQ8TDB6 740 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 RUFY1Q96T51 708 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 GOLPH3Q9H4A6 298 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 ACTL8Q9H568 366 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 AKIRIN1Q9H9L7 192 aaPredicted RBP22.34■■□□□ 1.17
PKP3-210ENST00000533249 FAM8A1Q9UBU6 413 aa22.34■■□□□ 1.17
PKP3-210ENST00000533249 DNMT3AQ9Y6K1 912 aaPredicted RBP22.34■■□□□ 1.17
PKP3-210ENST00000533249 LRRK2Q5S007 2527 aa22.33■■□□□ 1.17
PKP3-210ENST00000533249 GAPDHSO14556 408 aaPredicted RBP22.33■■□□□ 1.17
PKP3-210ENST00000533249 MTHFD1P11586 935 aaKnown RBP22.33■■□□□ 1.17
PKP3-210ENST00000533249 HLA-DPA1P20036 260 aa22.33■■□□□ 1.17
PKP3-210ENST00000533249 MSH3P20585 1137 aa22.33■■□□□ 1.17
PKP3-210ENST00000533249 PMS2P54278 862 aa22.33■■□□□ 1.17
PKP3-210ENST00000533249 ACY1Q03154 408 aa22.33■■□□□ 1.17
PKP3-210ENST00000533249 DUS1LQ6P1R4 473 aaKnown RBP22.33■■□□□ 1.17
PKP3-210ENST00000533249 FAM199XQ6PEV8 388 aaPredicted RBP22.33■■□□□ 1.17
PKP3-210ENST00000533249 NAT14Q8WUY8 206 aa22.33■■□□□ 1.17
PKP3-210ENST00000533249 FSD1LQ9BXM9 530 aa22.33■■□□□ 1.17
PKP3-210ENST00000533249 FGF21Q9NSA1 209 aa22.33■■□□□ 1.17
PKP3-210ENST00000533249 RSPH14Q9UHP6 348 aa22.33■■□□□ 1.17
PKP3-210ENST00000533249 UBA6A0AVT1 1052 aaPredicted RBP22.32■■□□□ 1.16
PKP3-210ENST00000533249 C21orf140B9A014 251 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 STX7O15400 261 aaKnown RBP22.32■■□□□ 1.16
PKP3-210ENST00000533249 PSTPIP1O43586 416 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 DNAJB5O75953 348 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 MLLT10P55197 1068 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 RPS18P62269 152 aaKnown RBP22.32■■□□□ 1.16
PKP3-210ENST00000533249 MPP3Q13368 585 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 LONRF2Q1L5Z9 754 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 TFDP3Q5H9I0 405 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 CCDC50Q8IVM0 306 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 TC2NQ8N9U0 490 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 ZNF514Q96K75 400 aaPredicted RBP22.32■■□□□ 1.16
PKP3-210ENST00000533249 C12orf66Q96MD2 445 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 FCRL4Q96PJ5 515 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 QKIQ96PU8 341 aaKnown RBP eCLIP22.32■■□□□ 1.16
PKP3-210ENST00000533249 PANX2Q96RD6 677 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 INSM2Q96T92 566 aaPredicted RBP22.32■■□□□ 1.16
PKP3-210ENST00000533249 VAT1Q99536 393 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 WWP1Q9H0M0 922 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 HRASLS2Q9NWW9 162 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 INTUQ9ULD6 942 aa22.32■■□□□ 1.16
PKP3-210ENST00000533249 hCG_1818297A0A087WSY0 165 aa22.31■■□□□ 1.16
PKP3-210ENST00000533249 OR5K3A6NET4 321 aa22.31■■□□□ 1.16
PKP3-210ENST00000533249 TLCD2A6NGC4 264 aa22.31■■□□□ 1.16
PKP3-210ENST00000533249 TCEAL1Q15170 157 aa22.31■■□□□ 1.16
PKP3-210ENST00000533249 METRNLQ641Q3 311 aa22.31■■□□□ 1.16
PKP3-210ENST00000533249 KMT5CQ86Y97 462 aa22.31■■□□□ 1.16
PKP3-210ENST00000533249 ZNF398Q8TD17 642 aa22.31■■□□□ 1.16
PKP3-210ENST00000533249 MIB2Q96AX9 1013 aa22.31■■□□□ 1.16
PKP3-210ENST00000533249 CD180Q99467 661 aa22.31■■□□□ 1.16
PKP3-210ENST00000533249 FICDQ9BVA6 458 aa22.31■■□□□ 1.16
PKP3-210ENST00000533249 SMOXQ9NWM0 555 aa22.31■■□□□ 1.16
PKP3-210ENST00000533249 ALG6Q9Y672 507 aa22.31■■□□□ 1.16
PKP3-210ENST00000533249 ARL5AQ9Y689 179 aa22.31■■□□□ 1.16
PKP3-210ENST00000533249 RELNP78509 3460 aa22.3■■□□□ 1.16
PKP3-210ENST00000533249 ZRANB2O95218 330 aaKnown RBP eCLIP22.3■■□□□ 1.16
PKP3-210ENST00000533249 PRAMEF1O95521 474 aa22.3■■□□□ 1.16
PKP3-210ENST00000533249 RECKO95980 971 aa22.3■■□□□ 1.16
PKP3-210ENST00000533249 AGTP01019 485 aa22.3■■□□□ 1.16
PKP3-210ENST00000533249 ARCN1P48444 511 aaKnown RBP22.3■■□□□ 1.16
PKP3-210ENST00000533249 MARCKSL1P49006 195 aa22.3■■□□□ 1.16
PKP3-210ENST00000533249 HSD11B2P80365 405 aa22.3■■□□□ 1.16
PKP3-210ENST00000533249 GPR19Q15760 415 aa22.3■■□□□ 1.16
PKP3-210ENST00000533249 ARMC6Q6NXE6 501 aa22.3■■□□□ 1.16
PKP3-210ENST00000533249 BPHLQ86WA6 291 aaPredicted RBP22.3■■□□□ 1.16
PKP3-210ENST00000533249 OOSP2Q86WS3 158 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms