RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 XAB2Q9HCS7 855 aaKnown RBP8.17□□□□□ -1.1
NEDD8-207ENST00000533242 MKS1Q9NXB0 559 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 ARHGEF38Q9NXL2 777 aa8.17□□□□□ -1.1
NEDD8-207ENST00000533242 NAV2Q8IVL1 2488 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 CHD5Q8TDI0 1954 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 IGLON5A6NGN9 336 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 DRGXA6NNA5 263 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 DNAJC6O75061 913 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 ZNF821O75541 412 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-207ENST00000533242 ATP5HO75947 161 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 KRT38O76015 456 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 BPGMP07738 259 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 CCKBRP32239 447 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 CD68P34810 354 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-207ENST00000533242 CRHR1P34998 444 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 SERPINH1P50454 418 aaKnown RBP8.16□□□□□ -1.1
NEDD8-207ENST00000533242 ERFP50548 548 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 THOP1P52888 689 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 YPEL5P62699 121 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 NFKB2Q00653 900 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 DEUP1Q05D60 604 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 ZBTB17Q13105 803 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 PRRT3Q5FWE3 981 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 BRMS1LQ5PSV4 323 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 ACBD5Q5T8D3 534 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-207ENST00000533242 RETSATQ6NUM9 610 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 LRRC8BQ6P9F7 803 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 PARS2Q7L3T8 475 aaKnown RBP8.16□□□□□ -1.1
NEDD8-207ENST00000533242 CMC1Q7Z7K0 106 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 NUDCD3Q8IVD9 361 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 FSTL5Q8N475 847 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-207ENST00000533242 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.16□□□□□ -1.1
NEDD8-207ENST00000533242 GPATCH11Q8N954 259 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 WDR60Q8WVS4 1066 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 EXTL1Q92935 676 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 TMEM74Q96NL1 305 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 RAB3IPQ96QF0 476 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-207ENST00000533242 APOL2Q9BQE5 337 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 LRRC61Q9BV99 259 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 SIK2Q9H0K1 926 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 TCEAL2Q9H3H9 227 aaPredicted RBP8.16□□□□□ -1.1
NEDD8-207ENST00000533242 RNPEPL1Q9HAU8 725 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 SAR1AQ9NR31 198 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 RRN3Q9NYV6 651 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 NOP53Q9NZM5 478 aaKnown RBP8.16□□□□□ -1.1
NEDD8-207ENST00000533242 MGAQ8IWI9 3026 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 LRRK1Q38SD2 2015 aa8.16□□□□□ -1.1
NEDD8-207ENST00000533242 SDR42E2A6NKP2 422 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 CAPN14A8MX76 684 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 EEF2KO00418 725 aaKnown RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 NVLO15381 856 aaKnown RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 YY2O15391 372 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 GSC2O15499 205 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 ZMPSTE24O75844 475 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 WFS1O76024 890 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 FGF3P11487 239 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 DESP17661 470 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 PTPN3P26045 913 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 ADRA1BP35368 520 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 CXCR3P49682 368 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 AQP5P55064 265 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 SNX16P57768 344 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 C1orf61Q13536 156 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 PAFAH1B3Q15102 231 aaKnown RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 TBR1Q16650 682 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 SPDYAQ5MJ70 313 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 MANEAQ5SRI9 462 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 MACC1Q6ZN28 852 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 MARK2Q7KZI7 788 aaKnown RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 MAVSQ7Z434 540 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 PLPP6Q8IY26 295 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 ARL10Q8N8L6 244 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 ZSCAN1Q8NBB4 408 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 CCDC74AQ96AQ1 378 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 MOCOSQ96EN8 888 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 C7orf26Q96N11 449 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 GFM1Q96RP9 751 aaKnown RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 AGAP2Q99490 1192 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 CLPBQ9H078 707 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 UBP1Q9NZI7 540 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 ANKMY1Q9P2S6 941 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 MTO1Q9Y2Z2 717 aaKnown RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 A0A0D9SEW6 157 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 CXorf51AA0A1B0GTR3 108 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 ILVBLA1L0T0 632 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 CCDC78A2IDD5 438 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 HACD1B0YJ81 288 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 D6RAR5 112 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 H3BRJ5 948 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 CASC3O15234 703 aaKnown RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 GSTA2P09210 222 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 FAM87AP0C7U9 286 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 IGFALSP35858 605 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 FDFT1P37268 417 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 ABL2P42684 1182 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 CCNHP51946 323 aaPredicted RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 CCL7P80098 99 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 SRSF6Q13247 344 aaKnown RBP8.15□□□□□ -1.1
NEDD8-207ENST00000533242 TUBB3Q13509 450 aa8.15□□□□□ -1.1
NEDD8-207ENST00000533242 UBAP2LQ14157 1087 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms