RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 FGGP02679 453 aa29.67■■■□□ 2.34
SSSCA1-207ENST00000533115 ATP1B2P14415 290 aaPredicted RBP29.67■■■□□ 2.34
SSSCA1-207ENST00000533115 VAC14Q08AM6 782 aa29.67■■■□□ 2.34
SSSCA1-207ENST00000533115 SEMA5AQ13591 1074 aa29.67■■■□□ 2.34
SSSCA1-207ENST00000533115 PPP1R21Q6ZMI0 780 aa29.67■■■□□ 2.34
SSSCA1-207ENST00000533115 GLIS1Q8NBF1 620 aa29.67■■■□□ 2.34
SSSCA1-207ENST00000533115 PMEPA1Q969W9 287 aa29.67■■■□□ 2.34
SSSCA1-207ENST00000533115 CCNL2Q96S94 520 aaPredicted RBP29.67■■■□□ 2.34
SSSCA1-207ENST00000533115 DDA1Q9BW61 102 aa29.67■■■□□ 2.34
SSSCA1-207ENST00000533115 SLC39A1Q9NY26 324 aa29.67■■■□□ 2.34
SSSCA1-207ENST00000533115 ACSL5Q9ULC5 683 aa29.67■■■□□ 2.34
SSSCA1-207ENST00000533115 DRG1Q9Y295 367 aaKnown RBP29.67■■■□□ 2.34
SSSCA1-207ENST00000533115 IGLV3-16A0A075B6K0 115 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 GAS8O95995 478 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 C9P02748 559 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 PSMA3P25788 255 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 ACRV1P26436 265 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 PRLHRP49683 370 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 GFERP55789 205 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 SKIDA1Q1XH10 827 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 CCDC81Q6ZN84 652 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 MICALCLQ6ZW33 695 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 TAS2R42Q7RTR8 314 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 SERPINA9Q86WD7 417 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 BMPERQ8N8U9 685 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 GPR150Q8NGU9 434 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 SNRNP27Q8WVK2 155 aaKnown RBP29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 FAM8A1Q9UBU6 413 aa29.66■■■□□ 2.34
SSSCA1-207ENST00000533115 MGAQ8IWI9 3026 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 CEP104O60308 925 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 PRSS56P0CW18 603 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 ARSDP51689 593 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 RAB15P59190 212 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 CACNG1Q06432 222 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 CCDC38Q502W7 563 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 XKR5Q6UX68 686 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 DTX1Q86Y01 620 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 C9orf72Q96LT7 481 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 BBC3Q96PG8 261 aaPredicted RBP29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 ASPSCR1Q9BZE9 553 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 WWP1Q9H0M0 922 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 PCDHB11Q9Y5F2 797 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 B3GALT1Q9Y5Z6 326 aa29.65■■■□□ 2.34
SSSCA1-207ENST00000533115 CCDC78A2IDD5 438 aa29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 IQCJ-SCHIP1C9J366 451 aaPredicted RBP29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 K7ENP7 123 aa29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 CAPN5O15484 640 aaPredicted RBP29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 ANKRD34CP0C6C1 535 aa29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 ZSCAN5DPP0CG00 497 aa29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 MTHFD1P11586 935 aaKnown RBP29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 CXCR5P32302 372 aa29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 RPL22P35268 128 aaKnown RBP29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 GRIA1P42261 906 aa29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 CAPZBP47756 277 aa29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 DCAF12Q5T6F0 453 aa29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 INO80CQ6PI98 192 aaPredicted RBP29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 RSC1A1Q92681 617 aa29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 TGM7Q96PF1 710 aa29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 INSM2Q96T92 566 aaPredicted RBP29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 IMP3Q9NV31 184 aaKnown RBP29.64■■■□□ 2.34
SSSCA1-207ENST00000533115 HEATR9A2RTY3 570 aa29.63■■■□□ 2.33
SSSCA1-207ENST00000533115 STMND1H3BQB6 276 aa29.63■■■□□ 2.33
SSSCA1-207ENST00000533115 MC2RQ01718 297 aa29.63■■■□□ 2.33
SSSCA1-207ENST00000533115 LAMB3Q13751 1172 aa29.63■■■□□ 2.33
SSSCA1-207ENST00000533115 PIANPQ8IYJ0 282 aa29.63■■■□□ 2.33
SSSCA1-207ENST00000533115 CFAP206Q8IYR0 622 aa29.63■■■□□ 2.33
SSSCA1-207ENST00000533115 HM13Q8TCT9 377 aa29.63■■■□□ 2.33
SSSCA1-207ENST00000533115 CASS4Q9NQ75 786 aa29.63■■■□□ 2.33
SSSCA1-207ENST00000533115 CFAP20Q9Y6A4 193 aaKnown RBP29.63■■■□□ 2.33
SSSCA1-207ENST00000533115 SMG1Q96Q15 3661 aaKnown RBP29.63■■■□□ 2.33
SSSCA1-207ENST00000533115 C17orf113A0A1B0GUU1 675 aa29.62■■■□□ 2.33
SSSCA1-207ENST00000533115 TOX3O15405 576 aaPredicted RBP29.62■■■□□ 2.33
SSSCA1-207ENST00000533115 APRTP07741 180 aa29.62■■■□□ 2.33
SSSCA1-207ENST00000533115 SLC35G4P0C7Q5 338 aa29.62■■■□□ 2.33
SSSCA1-207ENST00000533115 MSNP26038 577 aaKnown RBP29.62■■■□□ 2.33
SSSCA1-207ENST00000533115 ANKS6Q68DC2 871 aa29.62■■■□□ 2.33
SSSCA1-207ENST00000533115 C4orf22Q6V702 233 aa29.62■■■□□ 2.33
SSSCA1-207ENST00000533115 LILRA3Q8N6C8 439 aaPredicted RBP29.62■■■□□ 2.33
SSSCA1-207ENST00000533115 C12orf66Q96MD2 445 aa29.62■■■□□ 2.33
SSSCA1-207ENST00000533115 RANBP9Q96S59 729 aa29.62■■■□□ 2.33
SSSCA1-207ENST00000533115 FBXO8Q9NRD0 319 aa29.62■■■□□ 2.33
SSSCA1-207ENST00000533115 EPHA6Q9UF33 1036 aa29.62■■■□□ 2.33
SSSCA1-207ENST00000533115 EFSO43281 561 aa29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 POLBP06746 335 aa29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 ADRA1DP25100 572 aa29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 LEPRP48357 1165 aaKnown RBP29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 DBN1Q16643 649 aa29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 GSTA5Q7RTV2 222 aa29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 SPDYE1Q8NFV5 336 aaPredicted RBP29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 ZDHHC12Q96GR4 267 aa29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 TEFMQ96QE5 360 aaKnown RBP29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 CCM2Q9BSQ5 444 aa29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 RAB33BQ9H082 229 aa29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 HOMER3Q9NSC5 361 aa29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 RIMKLBQ9ULI2 386 aa29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 SDK2Q58EX2 2172 aa29.61■■■□□ 2.33
SSSCA1-207ENST00000533115 CCDC162PA2VCL2 907 aa29.6■■■□□ 2.33
SSSCA1-207ENST00000533115 GOLGA6L3A6NEY3 463 aa29.6■■■□□ 2.33
SSSCA1-207ENST00000533115 MANEAQ5SRI9 462 aa29.6■■■□□ 2.33
SSSCA1-207ENST00000533115 TSTD2Q5T7W7 516 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms