RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 PPP2R5EQ16537 467 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 STX1AQ16623 288 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 PTCHD3Q3KNS1 767 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 FNBP1LQ5T0N5 605 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 MLIPQ5VWP3 458 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 IZUMO3Q5VZ72 239 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 PDPK2PQ6A1A2 396 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 DUS1LQ6P1R4 473 aaKnown RBP12.72□□□□□ -0.37
COPB1-209ENST00000533096 OOSP2Q86WS3 158 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 KMT5CQ86Y97 462 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 SLC25A41Q8N5S1 370 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 BEND7Q8N7W2 519 aaPredicted RBP12.72□□□□□ -0.37
COPB1-209ENST00000533096 NIPA2Q8N8Q9 360 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 FAM71BQ8TC56 605 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 BRSK1Q8TDC3 778 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 NAT14Q8WUY8 206 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 CPLX3Q8WVH0 158 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 CPT1BQ92523 772 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 FATE1Q969F0 183 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 ZNF501Q96CX3 271 aaPredicted RBP12.72□□□□□ -0.37
COPB1-209ENST00000533096 TRIB3Q96RU7 358 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 MAK16Q9BXY0 300 aaKnown RBP12.72□□□□□ -0.37
COPB1-209ENST00000533096 NLNQ9BYT8 704 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 KLHL25Q9H0H3 589 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 WWP1Q9H0M0 922 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 CBX8Q9HC52 389 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 SEMA5BQ9P283 1151 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 PCDHGB7Q9Y5F8 929 aa12.72□□□□□ -0.37
COPB1-209ENST00000533096 COPG1Q9Y678 874 aaKnown RBP12.72□□□□□ -0.37
COPB1-209ENST00000533096 ANKUB1A6NFN9 424 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 WIPF3A6NGB9 483 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 TLCD2A6NGC4 264 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 LDB2O43679 373 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 KCNJ13O60928 360 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 CEACAM4O75871 244 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 CYP1A2P05177 515 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 CDH3P22223 829 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 CA5AP35218 305 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 PREPP48147 710 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 ATP1A4Q13733 1029 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 LAMB3Q13751 1172 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 NOMO1Q15155 1222 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 FAM151BQ6UXP7 276 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 MED25Q71SY5 747 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 DSELQ8IZU8 1212 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 IQCKQ8N0W5 287 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 TTC13Q8NBP0 860 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 SPDYE1Q8NFV5 336 aaPredicted RBP12.71□□□□□ -0.37
COPB1-209ENST00000533096 ADAMTS17Q8TE56 1095 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 RAPGEF5Q92565 580 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 HDAC11Q96DB2 347 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 IMP4Q96G21 291 aaKnown RBP12.71□□□□□ -0.37
COPB1-209ENST00000533096 C12orf66Q96MD2 445 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 NAP1L5Q96NT1 182 aaPredicted RBP12.71□□□□□ -0.37
COPB1-209ENST00000533096 RANBP9Q96S59 729 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 CD180Q99467 661 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 ILKAPQ9H0C8 392 aaPredicted RBP12.71□□□□□ -0.37
COPB1-209ENST00000533096 IL26Q9NPH9 171 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 CTTNBP2NLQ9P2B4 639 aa12.71□□□□□ -0.37
COPB1-209ENST00000533096 ARHGAP10A1A4S6 786 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 TMEM150CB9EJG8 249 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 MASP2O00187 686 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 GPR39O43194 453 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 NDST3O95803 873 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 RAB40ALP0C0E4 278 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 MTHFD1P11586 935 aaKnown RBP12.7□□□□□ -0.38
COPB1-209ENST00000533096 CYP2A7P20853 494 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 KDELR1P24390 212 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 TNFRSF8P28908 595 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 KPNA2P52292 529 aaKnown RBP12.7□□□□□ -0.38
COPB1-209ENST00000533096 RRADP55042 308 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 IFI35P80217 286 aaPredicted RBP12.7□□□□□ -0.38
COPB1-209ENST00000533096 PRKAA1Q13131 559 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 ZRANB3Q5FWF4 1079 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 C1QL3Q5VWW1 255 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 LYPLAL1Q5VWZ2 237 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 NPNTQ6UXI9 565 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 TMEM102Q8N9M5 508 aaPredicted RBP12.7□□□□□ -0.38
COPB1-209ENST00000533096 GLIS1Q8NBF1 620 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 OR8K5Q8NH50 307 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 OR1L3Q8NH93 324 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.7□□□□□ -0.38
COPB1-209ENST00000533096 RNF157Q96PX1 679 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 VPS35Q96QK1 796 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 ZNF670Q9BS34 389 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 SLC25A51Q9H1U9 297 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 ACTR5Q9H9F9 607 aaPredicted RBP12.7□□□□□ -0.38
COPB1-209ENST00000533096 FANCEQ9HB96 536 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 SERTAD3Q9UJW9 196 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 GTF3C3Q9Y5Q9 886 aa12.7□□□□□ -0.38
COPB1-209ENST00000533096 USP9XQ93008 2570 aaPredicted RBP12.69□□□□□ -0.38
COPB1-209ENST00000533096 A0A087X0T9 212 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 GSAPA4D1B5 854 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 MAP3K7O43318 606 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 FAM228BP0C875 321 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 MSH3P20585 1137 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 AGXTP21549 392 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 AKT1P31749 480 aa12.69□□□□□ -0.38
COPB1-209ENST00000533096 PPIDQ08752 370 aaKnown RBP12.69□□□□□ -0.38
COPB1-209ENST00000533096 ABRQ12979 859 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms