RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 CACNA1DQ01668 2161 aa12.16□□□□□ -0.46
CAPN1-223ENST00000533079 OR5K3A6NET4 321 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 MEN1O00255 615 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 ATMINO43313 823 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-223ENST00000533079 MSL3P1P0C860 447 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 GRNP28799 593 aaKnown RBP12.15□□□□□ -0.46
CAPN1-223ENST00000533079 RORAP35398 523 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 TERF1P54274 439 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 PPP1CAP62136 330 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 CDK18Q07002 472 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 DMPKQ09013 629 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 GALNT2Q10471 571 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 PLCL1Q15111 1095 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 SMTNL2Q2TAL5 461 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 PLEKHN1Q494U1 663 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-223ENST00000533079 OOSP2Q86WS3 158 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 ZNF547Q8IVP9 402 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 CLEC1AQ8NC01 280 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 ARRDC2Q8TBH0 407 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 HSPH1Q92598 858 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 TRIM11Q96F44 468 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 FER1L6-AS2Q96M78 137 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 VPS35Q96QK1 796 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 RANBP9Q96S59 729 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 MAP3K3Q99759 626 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 C17orf62Q9BQA9 187 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 SYT11Q9BT88 431 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 DHRS4Q9BTZ2 278 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 MRPL47Q9HD33 250 aaKnown RBP12.15□□□□□ -0.46
CAPN1-223ENST00000533079 TAS2R14Q9NYV8 317 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 BTRCQ9Y297 605 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 TTLL3Q9Y4R7 772 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 COPG1Q9Y678 874 aaKnown RBP12.15□□□□□ -0.46
CAPN1-223ENST00000533079 APCP25054 2843 aa12.15□□□□□ -0.46
CAPN1-223ENST00000533079 ADGRG4Q8IZF6 3080 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 CELSR1Q9NYQ6 3014 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 RP1L1Q8IWN7 2480 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-223ENST00000533079 A6NL46 340 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 CDK14O94921 469 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 MYBL1P10243 752 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 IL4RP24394 825 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 CCNCP24863 283 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 ITGA3P26006 1051 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 IL1R2P27930 398 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 DRG2P55039 364 aaKnown RBP12.14□□□□□ -0.47
CAPN1-223ENST00000533079 ADCY2Q08462 1091 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 ATP1A4Q13733 1029 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 GTF2H3Q13889 308 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 IHHQ14623 411 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 MYBPC3Q14896 1274 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 NCF4Q15080 339 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 ZRSR2Q15696 482 aaKnown RBP12.14□□□□□ -0.47
CAPN1-223ENST00000533079 IFI16Q16666 785 aaKnown RBP12.14□□□□□ -0.47
CAPN1-223ENST00000533079 QPCTQ16769 361 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 CRB2Q5IJ48 1285 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 PLEKHS1Q5SXH7 462 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 ZFYVE27Q5T4F4 411 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 FAM198BQ6UWH4 519 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 C11orf96Q7Z7L8 435 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 CCDC170Q8IYT3 715 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 CISD2Q8N5K1 135 aaKnown RBP12.14□□□□□ -0.47
CAPN1-223ENST00000533079 ZBTB2Q8N680 514 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 GPR26Q8NDV2 337 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 COG1Q8WTW3 980 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 CPLX3Q8WVH0 158 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 TSGA13Q96PP4 275 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 TRIM7Q9C029 511 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 ZCCHC2Q9C0B9 1178 aaKnown RBP12.14□□□□□ -0.47
CAPN1-223ENST00000533079 PCDH18Q9HCL0 1135 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 ARFGAP3Q9NP61 516 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 RBM22Q9NW64 420 aaKnown RBP eCLIP12.14□□□□□ -0.47
CAPN1-223ENST00000533079 MYO6Q9UM54 1294 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 PCDHGA10Q9Y5H3 936 aa12.14□□□□□ -0.47
CAPN1-223ENST00000533079 ARHGAP10A1A4S6 786 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 C9J4A7 227 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 MATN2O00339 956 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 MFSD11O43934 449 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 RARAP10276 462 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 PRF1P14222 555 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 HADHAP40939 763 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 PAFAH1B3Q15102 231 aaKnown RBP12.13□□□□□ -0.47
CAPN1-223ENST00000533079 GPR19Q15760 415 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 KRTAP21-3Q3LHN1 58 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 ZNF648Q5T619 568 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-223ENST00000533079 ALS2CLQ60I27 953 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 ZNF662Q6ZS27 426 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 Q6ZS92 163 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 TRAPPC5Q8IUR0 188 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 MCEMP1Q8IX19 187 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 SYTL1Q8IYJ3 562 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 SLC38A9Q8NBW4 561 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 GPR150Q8NGU9 434 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 BRSK1Q8TDC3 778 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 ZFPM2Q8WW38 1151 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 CLIP3Q96DZ5 547 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 SRPK1Q96SB4 655 aaKnown RBP12.13□□□□□ -0.47
CAPN1-223ENST00000533079 UNKQ9C0B0 810 aaKnown RBP12.13□□□□□ -0.47
CAPN1-223ENST00000533079 MAGEE1Q9HCI5 957 aa12.13□□□□□ -0.47
CAPN1-223ENST00000533079 ZNHIT6Q9NWK9 470 aaKnown RBP12.13□□□□□ -0.47
CAPN1-223ENST00000533079 SOHLH2Q9NX45 425 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms