RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 PCOLCE2Q9UKZ9 415 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 BTBD3Q9Y2F9 522 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 COMMD10Q9Y6G5 202 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 CCDC151A5D8V7 595 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 IQCF5A8MTL0 148 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 PDZK1P1A8MUH7 402 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 B4DGG1 531 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 E5RI56 91 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 TM4SF5O14894 197 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 LIN7AO14910 233 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 ACSL3O95573 720 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 FAM153BP0C7A2 387 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 SLC2A4P14672 509 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 ITGB6P18564 788 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 CSRP1P21291 193 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 RPL10P27635 214 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 GABRB3P28472 473 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 HALP42357 657 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 CD151P48509 253 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 DUSP3P51452 185 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 PMS2P54278 862 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 PLOD1Q02809 727 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 RPA4Q13156 261 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 GPS2Q13227 327 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 BIRC2Q13490 618 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 NFE2L1Q14494 772 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 NR0B2Q15466 257 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 FAM153CQ494X1 144 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 CTSL3PQ5NE16 218 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 WDR93Q6P2C0 686 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 IYDQ6PHW0 289 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 ABRAXAS1Q6UWZ7 409 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 WASH2PQ6VEQ5 465 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 STRA8Q7Z7C7 330 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 PIP4P1Q86T03 277 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 CTAGE3PQ8IX95 158 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 KRT222Q8N1A0 295 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 ARL10Q8N8L6 244 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 ASZ1Q8WWH4 475 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 ELMO1Q92556 727 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 CNDP2Q96KP4 475 aaKnown RBP11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 APOLD1Q96LR9 279 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 BIRC8Q96P09 236 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 RTKNQ9BST9 563 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 ACBD3Q9H3P7 528 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 WASH6PQ9NQA3 447 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 PRDM8Q9NQV8 689 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 FTSJ1Q9UET6 329 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 PI4KAP42356 2102 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 SCN8AQ9UQD0 1980 aa11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 EP300Q09472 2414 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC4-211ENST00000533012 TRBV23OR9-2A0A075B6M9 112 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 KIR2DS5A0A0G2JLQ3 304 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 A0A0G2JNG1 304 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 PRR19A6NJB7 356 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 FAM159BA6NKW6 160 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 KIR2DS3K7RE56 304 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 TNFSF14O43557 240 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 CBFA2T3O75081 653 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 APOA4P06727 396 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 MYBL2P10244 700 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 F3P13726 295 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 H2AFXP16104 143 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 CCR7P32248 378 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 VSNL1P62760 191 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 DAB2P98082 770 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 NAB1Q13506 487 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 KIR2DS5Q14953 304 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 TRIP6Q15654 476 aaKnown RBP11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 SEPT7Q16181 437 aaKnown RBP11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 PROX2Q3B8N5 592 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 KBTBD12Q3ZCT8 623 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 C14orf28Q4W4Y0 310 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 AGAP9Q5VTM2 703 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 FAM83HQ6ZRV2 1179 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 OTOAQ7RTW8 1153 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 GSPT2Q8IYD1 628 aaKnown RBP11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 NAGSQ8N159 534 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 ARL14Q8N4G2 192 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 PPM1NQ8N819 430 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 DEFB124Q8NES8 71 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 GPR156Q8NFN8 814 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 OR6C4Q8NGE1 309 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 MAPK15Q8TD08 544 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 TMEM159Q96B96 161 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 CYTH2Q99418 400 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 CPNE1Q99829 537 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 PARD6BQ9BYG5 372 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 COG4Q9H9E3 785 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 SARS2Q9NP81 518 aaKnown RBP11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 SMYD2Q9NRG4 433 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 SLC17A6Q9P2U8 582 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 RABGEF1Q9UJ41 708 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 CORO1CQ9ULV4 474 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 PADI4Q9UM07 663 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 VWA7Q9Y334 891 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 RALGAPA1Q6GYQ0 2036 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 CACNA1EQ15878 2313 aa11.02□□□□□ -0.65
TRAPPC4-211ENST00000533012 MYLKQ15746 1914 aa11.01□□□□□ -0.65
TRAPPC4-211ENST00000533012 ADAMTS9Q9P2N4 1935 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms