RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 KIAA0930Q6ICG6 404 aaPredicted RBP19.46■□□□□ 0.71
CPSF1-209ENST00000532725 ZNF574Q6ZN55 896 aaPredicted RBP19.46■□□□□ 0.71
CPSF1-209ENST00000532725 ZNF572Q7Z3I7 529 aaPredicted RBP19.46■□□□□ 0.71
CPSF1-209ENST00000532725 B3GNT8Q7Z7M8 397 aa19.46■□□□□ 0.71
CPSF1-209ENST00000532725 HM13Q8TCT9 377 aa19.46■□□□□ 0.71
CPSF1-209ENST00000532725 ATXN7L3BQ96GX2 97 aa19.46■□□□□ 0.71
CPSF1-209ENST00000532725 INSM2Q96T92 566 aaPredicted RBP19.46■□□□□ 0.71
CPSF1-209ENST00000532725 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.46■□□□□ 0.71
CPSF1-209ENST00000532725 STN1Q9H668 368 aaKnown RBP19.46■□□□□ 0.71
CPSF1-209ENST00000532725 SAMD15Q9P1V8 674 aa19.46■□□□□ 0.71
CPSF1-209ENST00000532725 ASPMQ8IZT6 3477 aa19.46■□□□□ 0.71
CPSF1-209ENST00000532725 ZCWPW2A0A1B0GU75 182 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 CPNE6O95741 557 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 POLBP06746 335 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 GSTM1P09488 218 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 HALP42357 657 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 GPLD1P80108 840 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 MRPS25P82663 173 aaKnown RBP19.45■□□□□ 0.7
CPSF1-209ENST00000532725 GSTM4Q03013 218 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 MORF4L2Q15014 288 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 MSS51Q4VC12 460 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 AARS2Q5JTZ9 985 aaKnown RBP19.45■□□□□ 0.7
CPSF1-209ENST00000532725 CAPRIN2Q6IMN6 1127 aaKnown RBP19.45■□□□□ 0.7
CPSF1-209ENST00000532725 HIBCHQ6NVY1 386 aaPredicted RBP19.45■□□□□ 0.7
CPSF1-209ENST00000532725 TMEM26Q6ZUK4 368 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 PIM3Q86V86 326 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 GPR150Q8NGU9 434 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 WWP1Q9H0M0 922 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 VPS37BQ9H9H4 285 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 RDH14Q9HBH5 336 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 POT1Q9NUX5 634 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 FAM8A1Q9UBU6 413 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 CDC23Q9UJX2 597 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 RPS6KL1Q9Y6S9 549 aa19.45■□□□□ 0.7
CPSF1-209ENST00000532725 IGF2RP11717 2491 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 PIKFYVEQ9Y2I7 2098 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 A0A1W2PNU3 283 aaPredicted RBP19.44■□□□□ 0.7
CPSF1-209ENST00000532725 GOLGA8KD6RF30 607 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 GOLGA8TH3BQL2 631 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 SMAPO00193 183 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 QSOX1O00391 747 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 TUBB4AP04350 444 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 PROS1P07225 676 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 HOXB3P14651 431 aaPredicted RBP19.44■□□□□ 0.7
CPSF1-209ENST00000532725 CCKBRP32239 447 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 TTPAP49638 278 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 EPHA4P54764 986 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 CYP4F3Q08477 520 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 C2orf54Q08AI8 447 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 SLITRK4Q8IW52 837 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 TRIM48Q8IWZ4 208 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 RBM12BQ8IXT5 1001 aaKnown RBP19.44■□□□□ 0.7
CPSF1-209ENST00000532725 KDF1Q8NAX2 398 aaPredicted RBP19.44■□□□□ 0.7
CPSF1-209ENST00000532725 SPDYE1Q8NFV5 336 aaPredicted RBP19.44■□□□□ 0.7
CPSF1-209ENST00000532725 CXorf40BQ96DE9 158 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 TMEM74Q96NL1 305 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 NUDT22Q9BRQ3 303 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 TBC1D10AQ9BXI6 508 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 FOXP3Q9BZS1 431 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 COG4Q9H9E3 785 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 MAD1L1Q9Y6D9 718 aa19.44■□□□□ 0.7
CPSF1-209ENST00000532725 FAM187AA6NFU0 413 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 LILRA5A6NI73 299 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 EFCAB8A8MWE9 144 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 TMX2-CTNND1H3BSU7 103 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 USP1O94782 785 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 SEC31AO94979 1220 aaKnown RBP19.43■□□□□ 0.7
CPSF1-209ENST00000532725 OR56A5P0C7T3 313 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 PAMP19021 973 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 PDHA2P29803 388 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 ITGA8P53708 1063 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 INHBCP55103 352 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 DHX9Q08211 1270 aaKnown RBP19.43■□□□□ 0.7
CPSF1-209ENST00000532725 RPA4Q13156 261 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 MRNIPQ6NTE8 343 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 NEPROQ6NW34 567 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 MAATS1Q7Z4T9 603 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 SDCCAG8Q86SQ7 713 aaPredicted RBP19.43■□□□□ 0.7
CPSF1-209ENST00000532725 OR10G6Q8NH81 332 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 ZNF669Q96BR6 464 aaPredicted RBP19.43■□□□□ 0.7
CPSF1-209ENST00000532725 TRIM44Q96DX7 344 aaPredicted RBP19.43■□□□□ 0.7
CPSF1-209ENST00000532725 STAMBPL1Q96FJ0 436 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 SNF8Q96H20 258 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 PWWP2AQ96N64 755 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 TCF12Q99081 682 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 TRIM31Q9BZY9 425 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 P2RY12Q9H244 342 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 OR52A5Q9H2C5 316 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 SEMA6CQ9H3T2 930 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 DKK4Q9UBT3 224 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 SNX24Q9Y343 169 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 FAM169AQ9Y6X4 670 aa19.43■□□□□ 0.7
CPSF1-209ENST00000532725 PRMT5O14744 637 aaPredicted RBP19.42■□□□□ 0.7
CPSF1-209ENST00000532725 RAD51CO43502 376 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 BANF1O75531 89 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 URI1O94763 535 aaPredicted RBP19.42■□□□□ 0.7
CPSF1-209ENST00000532725 FTH1P02794 183 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 MTHFD1P11586 935 aaKnown RBP19.42■□□□□ 0.7
CPSF1-209ENST00000532725 CSF2RBP32927 897 aa19.42■□□□□ 0.7
CPSF1-209ENST00000532725 RPL21P46778 160 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms