RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 C9P02748 559 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 ATP1B2P14415 290 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-204ENST00000532550 FDFT1P37268 417 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 ATP1A2P50993 1020 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 BCL7AQ4VC05 210 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 ANKS6Q68DC2 871 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 CEACAM20Q6UY09 585 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 TAS2R42Q7RTR8 314 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 CFAP206Q8IYR0 622 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 DNAAF3Q8N9W5 541 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 ZSCAN1Q8NBB4 408 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 PMEPA1Q969W9 287 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 ZDHHC12Q96GR4 267 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 CDKN2AIPNLQ96HQ2 116 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 LINC00615Q96LM1 132 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-204ENST00000532550 C9orf72Q96LT7 481 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 TGM7Q96PF1 710 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 ZPBPQ9BS86 351 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 ETNK1Q9HBU6 452 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 FBXO8Q9NRD0 319 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 ZDHHC3Q9NYG2 299 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 FAM8A1Q9UBU6 413 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 MN1Q10571 1320 aaPredicted RBP16.88■□□□□ 0.29
PHRF1-204ENST00000532550 ZNF106Q9H2Y7 1883 aaKnown RBP16.88■□□□□ 0.29
PHRF1-204ENST00000532550 SDK2Q58EX2 2172 aa16.88■□□□□ 0.29
PHRF1-204ENST00000532550 H7C0S8 307 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 POLR1CO15160 346 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-204ENST00000532550 TOX3O15405 576 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-204ENST00000532550 RASSF9O75901 435 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 POLBP06746 335 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 ANKRD34CP0C6C1 535 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 GFERP55789 205 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 CDH17Q12864 832 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 GSE1Q14687 1217 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 SKIDA1Q1XH10 827 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 KLHL35Q6PF15 583 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 PPP1R21Q6ZMI0 780 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 BMPERQ8N8U9 685 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 CCDC89Q8N998 374 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 TRIM58Q8NG06 486 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 OR52K1Q8NGK4 314 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 NAT14Q8WUY8 206 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 MAIP1Q8WWC4 291 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 JPH3Q8WXH2 748 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-204ENST00000532550 INSM2Q96T92 566 aaPredicted RBP16.87■□□□□ 0.29
PHRF1-204ENST00000532550 CTRCQ99895 268 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 WWP1Q9H0M0 922 aa16.87■□□□□ 0.29
PHRF1-204ENST00000532550 IMP3Q9NV31 184 aaKnown RBP16.87■□□□□ 0.29
PHRF1-204ENST00000532550 CAPZBP47756 277 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 SEPHS1P49903 392 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 CDKN1CP49918 316 aaPredicted RBP16.86■□□□□ 0.29
PHRF1-204ENST00000532550 ARSDP51689 593 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 CACNG1Q06432 222 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 LAMB3Q13751 1172 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 PLCL1Q15111 1095 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 CCNG2Q16589 344 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 KIAA1614Q5VZ46 1190 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 IRGCQ6NXR0 463 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 VASH2Q86V25 355 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 SERPINA9Q86WD7 417 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 IL22RA1Q8N6P7 574 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 ZFPM2Q8WW38 1151 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 RSC1A1Q92681 617 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 NKD1Q969G9 470 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 WBP1Q96G27 269 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 C12orf66Q96MD2 445 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 CCM2Q9BSQ5 444 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 RAB33BQ9H082 229 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 RAB6BQ9NRW1 208 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 EPHA6Q9UF33 1036 aa16.86■□□□□ 0.29
PHRF1-204ENST00000532550 CFAP20Q9Y6A4 193 aaKnown RBP16.86■□□□□ 0.29
PHRF1-204ENST00000532550 SMG1Q96Q15 3661 aaKnown RBP16.85■□□□□ 0.29
PHRF1-204ENST00000532550 TRBV5-4A0A0C4DH59 114 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 C17orf113A0A1B0GUU1 675 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 MROH6A6NGR9 719 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 SGTAO43765 313 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 SLC35G4P0C7Q5 338 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 MTHFD1P11586 935 aaKnown RBP16.85■□□□□ 0.29
PHRF1-204ENST00000532550 ETS1P14921 441 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 ACRV1P26436 265 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 LEPRP48357 1165 aaKnown RBP16.85■□□□□ 0.29
PHRF1-204ENST00000532550 PRLHRP49683 370 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 FOXM1Q08050 763 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 SRSF6Q13247 344 aaKnown RBP16.85■□□□□ 0.29
PHRF1-204ENST00000532550 KRT33BQ14525 404 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 CACHD1Q5VU97 1274 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 ZNF449Q6P9G9 518 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 FAM92BQ6ZTR7 304 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 GPR150Q8NGU9 434 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 VPS37BQ9H9H4 285 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 PAK5Q9P286 719 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 DRG1Q9Y295 367 aaKnown RBP16.85■□□□□ 0.29
PHRF1-204ENST00000532550 COLEC10Q9Y6Z7 277 aa16.85■□□□□ 0.29
PHRF1-204ENST00000532550 PIKFYVEQ9Y2I7 2098 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 IGLV3-16A0A075B6K0 115 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 CCDC78A2IDD5 438 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 HEATR9A2RTY3 570 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 SUN1O94901 812 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 FGGP02679 453 aa16.84■□□□□ 0.29
PHRF1-204ENST00000532550 MSNP26038 577 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms