RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 C16orf96A6NNT2 1141 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 CDC7O00311 574 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 SLC28A1O00337 649 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 E2F3O00716 465 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 NEMP1O14524 444 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 WNT9AO14904 365 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 PER2O15055 1255 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 UGDHO60701 494 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 TRIM16O95361 564 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 F7P08709 466 aaPredicted RBP12.09□□□□□ -0.47
CHD7-211ENST00000532149 TIMP2P16035 220 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 AOAHP28039 575 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 NRIP1P48552 1158 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 PRSS12P56730 875 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 DPTQ07507 201 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 CUL3Q13618 768 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 PTK2BQ14289 1009 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 FASTKQ14296 549 aaKnown RBP12.09□□□□□ -0.47
CHD7-211ENST00000532149 RPS6KA2Q15349 733 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 PPP1R3AQ16821 1122 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 MMEL1Q495T6 779 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 FAM78AQ5JUQ0 283 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 ATAT1Q5SQI0 421 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 HENMT1Q5T8I9 393 aaKnown RBP12.09□□□□□ -0.47
CHD7-211ENST00000532149 C1orf146Q5VVC0 180 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 CES5AQ6NT32 575 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 LRRC70Q7Z2Q7 622 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 ZSWIM9Q86XI8 627 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 PHTF2Q8N3S3 785 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 PHC3Q8NDX5 983 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 DNAJB8Q8NHS0 232 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 ITFG1Q8TB96 612 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 AGR3Q8TD06 166 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 TRPC4APQ8TEL6 797 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 BTN2A2Q8WVV5 523 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 FGF13Q92913 245 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 VOPP1Q96AW1 172 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 ELSPBP1Q96BH3 223 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 PPP3R2Q96LZ3 170 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 SPATA16Q9BXB7 569 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 CD244Q9BZW8 370 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 SLC28A3Q9HAS3 691 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 PARVBQ9HBI1 364 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 SARS2Q9NP81 518 aaKnown RBP12.09□□□□□ -0.47
CHD7-211ENST00000532149 OPTCQ9UBM4 332 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 TRPS1Q9UHF7 1281 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 CDH22Q9UJ99 828 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 SARDHQ9UL12 918 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 AP3M1Q9Y2T2 418 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 ANGPTL3Q9Y5C1 460 aa12.09□□□□□ -0.47
CHD7-211ENST00000532149 A0A088AWK7 358 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 LOC100653049A0A140TA62 436 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 SERTM1A2A2V5 107 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 HEPACAM2A8MVW5 462 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 GPR89AB7ZAQ6 455 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 K7EPI3 171 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 UBFD1O14562 309 aaKnown RBP12.08□□□□□ -0.48
CHD7-211ENST00000532149 PEX11AO75192 247 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 KRT34O76011 436 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 PSMG1O95456 288 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 C1SP09871 688 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 ELFN1P0C7U0 828 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 GPR89BP0CG08 455 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 PRR35P0CG20 571 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 PRSS56P0CW18 603 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 ACPPP15309 386 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 EPB42P16452 691 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 LHCGRP22888 699 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 MMP12P39900 470 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 ERVK-8P63133 956 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 NTHL1P78549 312 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 SLC34A1Q06495 639 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 TBL3Q12788 808 aaKnown RBP12.08□□□□□ -0.48
CHD7-211ENST00000532149 SFSWAPQ12872 951 aaKnown RBP12.08□□□□□ -0.48
CHD7-211ENST00000532149 TRAP1Q12931 704 aaKnown RBP12.08□□□□□ -0.48
CHD7-211ENST00000532149 GTF2H2Q13888 395 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 RBBP7Q16576 425 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 ATP13A5Q4VNC0 1218 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 TMEM215Q68D42 235 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 GTF2H2CQ6P1K8 395 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 CYHR1Q6ZMK1 362 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 BNC2Q6ZN30 1099 aaPredicted RBP12.08□□□□□ -0.48
CHD7-211ENST00000532149 MTSS1LQ765P7 747 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 TECPR1Q7Z6L1 1165 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 SNX32Q86XE0 403 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 PHYKPLQ8IUZ5 450 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 DEFB107AQ8IZN7 70 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 DSELQ8IZU8 1212 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 GOLM1Q8NBJ4 401 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 GIMAP7Q8NHV1 300 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 SUSD6Q92537 303 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 ATP6V1E2Q96A05 226 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 PRR11Q96HE9 360 aaPredicted RBP12.08□□□□□ -0.48
CHD7-211ENST00000532149 RIPOR3Q96MK2 946 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 FOPNLQ96NB1 174 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 HDAC8Q9BY41 377 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 MUC13Q9H3R2 512 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 SLC32A1Q9H598 525 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 PCDH12Q9NPG4 1184 aa12.08□□□□□ -0.48
CHD7-211ENST00000532149 SDR39U1Q9NRG7 319 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms