RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 CTAGE6Q86UF2 777 aa17.72■□□□□ 0.43
SCN4B-205ENST00000531550 PPP1R3BQ86XI6 285 aa17.72■□□□□ 0.43
SCN4B-205ENST00000531550 TRIM48Q8IWZ4 208 aa17.72■□□□□ 0.43
SCN4B-205ENST00000531550 CTAGE4Q8IX94 777 aa17.72■□□□□ 0.43
SCN4B-205ENST00000531550 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.72■□□□□ 0.43
SCN4B-205ENST00000531550 LYSMD1Q96S90 227 aa17.72■□□□□ 0.43
SCN4B-205ENST00000531550 BRD8Q9H0E9 1235 aa17.72■□□□□ 0.43
SCN4B-205ENST00000531550 FAM83DQ9H4H8 585 aa17.72■□□□□ 0.43
SCN4B-205ENST00000531550 ACTL8Q9H568 366 aa17.72■□□□□ 0.43
SCN4B-205ENST00000531550 KLC4Q9NSK0 619 aa17.72■□□□□ 0.43
SCN4B-205ENST00000531550 C1orf232A0A0U1RR37 186 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 KIF1CO43896 1103 aaKnown RBP17.71■□□□□ 0.43
SCN4B-205ENST00000531550 TIAF1O95411 115 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 PRLP01236 227 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 SLC19A1P41440 591 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 CAPZBP47756 277 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 PGDP52209 483 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 CCNG2Q16589 344 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 CPZQ66K79 652 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 NCBP2-AS2Q69YL0 99 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 DRICH1Q6PGQ1 229 aaPredicted RBP17.71■□□□□ 0.43
SCN4B-205ENST00000531550 BZW1Q7L1Q6 419 aaKnown RBP17.71■□□□□ 0.43
SCN4B-205ENST00000531550 PIAS4Q8N2W9 510 aaPredicted RBP17.71■□□□□ 0.43
SCN4B-205ENST00000531550 PRELID2Q8N945 189 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 LPCAT1Q8NF37 534 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 KLHL6Q8WZ60 621 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 RSC1A1Q92681 617 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 RUFY1Q96T51 708 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 SLC25A23Q9BV35 468 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 AP1M1Q9BXS5 423 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 ARFGAP3Q9NP61 516 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 PKD2L2Q9NZM6 624 aa17.71■□□□□ 0.43
SCN4B-205ENST00000531550 ZNF624Q9P2J8 865 aaPredicted RBP17.71■□□□□ 0.43
SCN4B-205ENST00000531550 SHANK1Q9Y566 2161 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 SLU7O95391 586 aaKnown RBP17.7■□□□□ 0.42
SCN4B-205ENST00000531550 CA4P22748 312 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 DYNLT1P63172 113 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 CHAF1BQ13112 559 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 UGT8Q16880 541 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 PLA2G4EQ3MJ16 856 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 ZNF648Q5T619 568 aaPredicted RBP17.7■□□□□ 0.42
SCN4B-205ENST00000531550 CACHD1Q5VU97 1274 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 CRTC3Q6UUV7 619 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 LRRC49Q8IUZ0 686 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 ACTL9Q8TC94 416 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 SEC14L1Q92503 715 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 MAML1Q92585 1016 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 P3H4Q92791 437 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 OR2AG1Q9H205 316 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 PCDH9Q9HC56 1237 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 R3HDM2Q9Y2K5 976 aaKnown RBP17.7■□□□□ 0.42
SCN4B-205ENST00000531550 TTLL3Q9Y4R7 772 aa17.7■□□□□ 0.42
SCN4B-205ENST00000531550 PCDHGA9Q9Y5G4 932 aaKnown RBP17.7■□□□□ 0.42
SCN4B-205ENST00000531550 MFSD11O43934 449 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 PHF2O75151 1096 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 NELFEP18615 380 aaKnown RBP17.69■□□□□ 0.42
SCN4B-205ENST00000531550 CES1P23141 567 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 RPL26P61254 145 aaKnown RBP17.69■□□□□ 0.42
SCN4B-205ENST00000531550 RPS18P62269 152 aaKnown RBP17.69■□□□□ 0.42
SCN4B-205ENST00000531550 TUBB4BP68371 445 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 OTUD4Q01804 1114 aaKnown RBP17.69■□□□□ 0.42
SCN4B-205ENST00000531550 XRCC4Q13426 336 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 NOMO1Q15155 1222 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 SEPT7Q16181 437 aaKnown RBP17.69■□□□□ 0.42
SCN4B-205ENST00000531550 INSCQ1MX18 579 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 CYB5D1Q6P9G0 228 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 FAM92BQ6ZTR7 304 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 MMGT1Q8N4V1 131 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 SLC35B2Q8TB61 432 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 ARRDC2Q8TBH0 407 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 THAP4Q8WY91 577 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 MAGOHBQ96A72 148 aaKnown RBP17.69■□□□□ 0.42
SCN4B-205ENST00000531550 RUNDC3BQ96NL0 473 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 MLXIPLQ9NP71 852 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 CASS4Q9NQ75 786 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 POT1Q9NUX5 634 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 SLC23A2Q9UGH3 650 aa17.69■□□□□ 0.42
SCN4B-205ENST00000531550 RPL26L1Q9UNX3 145 aaKnown RBP17.69■□□□□ 0.42
SCN4B-205ENST00000531550 DRG1Q9Y295 367 aaKnown RBP17.69■□□□□ 0.42
SCN4B-205ENST00000531550 RGSL1A5PLK6 1076 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 PDZK1P1A8MUH7 402 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 GPR89AB7ZAQ6 455 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 DDAH2O95865 285 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 GPR89BP0CG08 455 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 PECAM1P16284 738 aaPredicted RBP17.68■□□□□ 0.42
SCN4B-205ENST00000531550 PTPN4P29074 926 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 FNTAP49354 379 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 GBE1Q04446 702 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 NIPAL4Q0D2K0 466 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 SLC10A2Q12908 348 aaPredicted RBP17.68■□□□□ 0.42
SCN4B-205ENST00000531550 TUBB3Q13509 450 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 QPCTQ16769 361 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 PRR30Q53SZ7 412 aaPredicted RBP17.68■□□□□ 0.42
SCN4B-205ENST00000531550 ZNF787Q6DD87 383 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 IRGCQ6NXR0 463 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 NPNTQ6UXI9 565 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 ADGRG6Q86SQ4 1221 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 CCHCR1Q8TD31 782 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 C1orf54Q8WWF1 131 aa17.68■□□□□ 0.42
SCN4B-205ENST00000531550 ZDHHC12Q96GR4 267 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms