RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 THAP2Q9H0W7 228 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 OSGEPL1Q9H4B0 414 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 VIPAS39Q9H9C1 493 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 SLC40A1Q9NP59 571 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 LHX9Q9NQ69 397 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 AIPL1Q9NZN9 384 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 SEMA5BQ9P283 1151 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 TRIM10Q9UDY6 481 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 KCND3Q9UK17 655 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 PRDM4Q9UKN5 801 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 RPL26L1Q9UNX3 145 aaKnown RBP9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 DNAJC16Q9Y2G8 782 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 MAP4K5Q9Y4K4 846 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 HYOU1Q9Y4L1 999 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 TTLL3Q9Y4R7 772 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 PCDHB3Q9Y5E6 796 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 PCDHA13Q9Y5I0 950 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 SCINQ9Y6U3 715 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 SVILO95425 2214 aa9.03□□□□□ -0.96
CHMP4A-205ENST00000531158 ZGRF1Q86YA3 2104 aa9.02□□□□□ -0.96
CHMP4A-205ENST00000531158 PDZD2O15018 2839 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 TTLL8A6PVC2 850 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 BTNL10A8MVZ5 291 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 TCP11X1B4DZS4 312 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 AKR1B10O60218 316 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 VPS4BO75351 444 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 RASSF9O75901 435 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 RECKO95980 971 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 VIPP01282 170 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 SLC2A4P14672 509 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 ZNF7P17097 686 aaPredicted RBP9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 CD86P42081 329 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 MRPL49Q13405 166 aaKnown RBP9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 ASIC2Q16515 512 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 UGT8Q16880 541 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 TDRD12Q587J7 1177 aaKnown RBP9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 ANKRD20A8PQ5CZ79 823 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 CACHD1Q5VU97 1274 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 LCN10Q6JVE6 187 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 CCDC70Q6NSX1 233 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 ZNF517Q6ZMY9 492 aaPredicted RBP9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 PPP1R3BQ86XI6 285 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 NDUFAF2Q8N183 169 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 ADAMTS17Q8TE56 1095 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 NSMCE1Q8WV22 266 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 FATE1Q969F0 183 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 GLYATL1Q969I3 302 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 TCTN2Q96GX1 697 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 POM121Q96HA1 1249 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 SLC41A2Q96JW4 573 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 NUP85Q9BW27 656 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 LACRTQ9GZZ8 138 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 TRIM39Q9HCM9 518 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 POT1Q9NUX5 634 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 LUZP4Q9P127 313 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 NFKBIL1Q9UBC1 381 aaPredicted RBP9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 DNPEPQ9ULA0 475 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 PADI1Q9ULC6 663 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 SNX12Q9UMY4 172 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 VPS4AQ9UN37 437 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 CNTRLQ7Z7A1 2325 aa9.02□□□□□ -0.97
CHMP4A-205ENST00000531158 RGSL1A5PLK6 1076 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 RCCD1A6NED2 376 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 WIPF3A6NGB9 483 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 C21orf140B9A014 251 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 KCNK1O00180 336 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 AURKAO14965 403 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 GPR39O43194 453 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 CEACAM4O75871 244 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 SLC25A14O95258 325 aaPredicted RBP9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 CLDN1O95832 211 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 CCDC172P0C7W6 258 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 EBLN1P0CF75 366 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 MYBL1P10243 752 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 CCNCP24863 283 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 TAS2R40P59535 323 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 DCDC1P59894 354 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 VSNL1P62760 191 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 TUBB3Q13509 450 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 PIGHQ14442 188 aaPredicted RBP9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 IFI16Q16666 785 aaKnown RBP9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 INSCQ1MX18 579 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 AGAP9Q5VTM2 703 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 IRGCQ6NXR0 463 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 FAM83HQ6ZRV2 1179 aaPredicted RBP9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 LRRTM4Q86VH4 590 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 LRRC49Q8IUZ0 686 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 MMGT1Q8N4V1 131 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 TRAM1L1Q8N609 369 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 NOA1Q8NC60 698 aaKnown RBP9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 FAF2Q96CS3 445 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 TIMM29Q9BSF4 260 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 MLPHQ9BV36 600 aaPredicted RBP9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 SPATA16Q9BXB7 569 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 CEP41Q9BYV8 373 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 RAB33BQ9H082 229 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 ZFYVE1Q9HBF4 777 aa9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 MRPL47Q9HD33 250 aaKnown RBP9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 CUEDC1Q9NWM3 386 aaPredicted RBP9.01□□□□□ -0.97
CHMP4A-205ENST00000531158 PKD2L2Q9NZM6 624 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms