RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 TGFBR3LH3BV60 316 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 K7ELQ4 463 aaPredicted RBP8.02□□□□□ -1.13
CD44-232ENST00000531118 PCDH17O14917 1159 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 CCP110O43303 1012 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 WIPF1O43516 503 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 IGHEP01854 428 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 BRAFP15056 766 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 ZNF30P17039 623 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 GMPRP36959 345 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 STC1P52823 247 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 HSD11B2P80365 405 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 ADORA2A-AS1P86434 159 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 IL10RBQ08334 325 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 Q0VFX4 171 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 PKP1Q13835 747 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 INSCQ1MX18 579 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 DNTTIP2Q5QJE6 756 aaKnown RBP8.02□□□□□ -1.13
CD44-232ENST00000531118 LCE2CQ5TA81 110 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 FCRL6Q6DN72 434 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 KLHL10Q6JEL2 608 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 GBP6Q6ZN66 633 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 CEP97Q8IW35 865 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 FAM71AQ8IYT1 594 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 TTC30BQ8N4P2 665 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 NPWQ8N729 165 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 GPR150Q8NGU9 434 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 CXorf40BQ96DE9 158 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 CLIP3Q96DZ5 547 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 CCDC34Q96HJ3 373 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 DHTKD1Q96HY7 919 aaPredicted RBP8.02□□□□□ -1.13
CD44-232ENST00000531118 GBP5Q96PP8 586 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 NUDCD1Q96RS6 583 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 CD180Q99467 661 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 C11orf70Q9BRQ4 267 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 TRIM56Q9BRZ2 755 aaKnown RBP8.02□□□□□ -1.13
CD44-232ENST00000531118 DHRS4Q9BTZ2 278 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 SLC40A1Q9NP59 571 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 SIX2Q9NPC8 291 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 P4HTMQ9NXG6 502 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 SH3BGRL2Q9UJC5 107 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 FZD10Q9ULW2 581 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 CTNND2Q9UQB3 1225 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 BTRCQ9Y297 605 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 CPAMD8Q8IZJ3 1885 aa8.02□□□□□ -1.13
CD44-232ENST00000531118 VPS13CQ709C8 3753 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 DFFAO00273 331 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 FOXN3O00409 490 aaPredicted RBP8.01□□□□□ -1.13
CD44-232ENST00000531118 CCL21O00585 134 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 PEX12O00623 359 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 GNA14O95837 355 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 CYP11B1P15538 503 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 ZNF8P17098 575 aaPredicted RBP8.01□□□□□ -1.13
CD44-232ENST00000531118 HTR7P34969 479 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 HSPA9P38646 679 aaKnown RBP8.01□□□□□ -1.13
CD44-232ENST00000531118 PBX1P40424 430 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 CA7P43166 264 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 KIR3DL1P43629 444 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 SOX8P57073 446 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 SLC10A7Q0GE19 358 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 CDSNQ15517 529 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 EXOC3L4Q17RC7 722 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 C11orf91Q3C1V1 193 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 TDRD12Q587J7 1177 aaKnown RBP8.01□□□□□ -1.13
CD44-232ENST00000531118 ZNF789Q5FWF6 425 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 HENMT1Q5T8I9 393 aaKnown RBP8.01□□□□□ -1.13
CD44-232ENST00000531118 ARMC12Q5T9G4 340 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 ZNF385CQ66K41 422 aaPredicted RBP8.01□□□□□ -1.13
CD44-232ENST00000531118 ZNF324BQ6AW86 544 aaPredicted RBP8.01□□□□□ -1.13
CD44-232ENST00000531118 IGFL2Q6UWQ7 119 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 TRIM72Q6ZMU5 477 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 TGIF2LYQ8IUE0 185 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 PGBD5Q8N414 524 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 PIH1D2Q8WWB5 315 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 NELFBQ8WX92 580 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 CPA5Q8WXQ8 436 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 NR4A3Q92570 626 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 MTFMTQ96DP5 389 aaKnown RBP8.01□□□□□ -1.13
CD44-232ENST00000531118 WDR24Q96S15 920 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 MGME1Q9BQP7 344 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 TIMM29Q9BSF4 260 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 TLR10Q9BXR5 811 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 OR2AG1Q9H205 316 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 GSX1Q9H4S2 264 aaPredicted RBP8.01□□□□□ -1.13
CD44-232ENST00000531118 ACTR5Q9H9F9 607 aaPredicted RBP8.01□□□□□ -1.13
CD44-232ENST00000531118 FANCEQ9HB96 536 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 NOD2Q9HC29 1040 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 ARFGAP3Q9NP61 516 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 SOHLH2Q9NX45 425 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 ATXN10Q9UBB4 475 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 SLC23A2Q9UGH3 650 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 DNAJC12Q9UKB3 198 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 DNAJC16Q9Y2G8 782 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 PPIL1Q9Y3C6 166 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 PCDHGB6Q9Y5F9 930 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 COL6A5A8TX70 2615 aa8.01□□□□□ -1.13
CD44-232ENST00000531118 A0A0J9YYE9 177 aa8□□□□□ -1.13
CD44-232ENST00000531118 UBA6A0AVT1 1052 aaPredicted RBP8□□□□□ -1.13
CD44-232ENST00000531118 BICDL2A1A5D9 508 aa8□□□□□ -1.13
CD44-232ENST00000531118 OR5K3A6NET4 321 aa8□□□□□ -1.13
CD44-232ENST00000531118 TMEM150CB9EJG8 249 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms