RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 RAB11FIP2Q7L804 512 aa18.34■□□□□ 0.53
GMDS-208ENST00000530927 TRIM48Q8IWZ4 208 aa18.34■□□□□ 0.53
GMDS-208ENST00000530927 KLHL7Q8IXQ5 586 aa18.34■□□□□ 0.53
GMDS-208ENST00000530927 AGGF1Q8N302 714 aaeCLIP18.34■□□□□ 0.53
GMDS-208ENST00000530927 MFSD3Q96ES6 412 aa18.34■□□□□ 0.53
GMDS-208ENST00000530927 LIN37Q96GY3 246 aaPredicted RBP18.34■□□□□ 0.53
GMDS-208ENST00000530927 RMDN2Q96LZ7 410 aa18.34■□□□□ 0.53
GMDS-208ENST00000530927 TMEM74Q96NL1 305 aa18.34■□□□□ 0.53
GMDS-208ENST00000530927 INSM2Q96T92 566 aaPredicted RBP18.34■□□□□ 0.53
GMDS-208ENST00000530927 WASH6PQ9NQA3 447 aa18.34■□□□□ 0.53
GMDS-208ENST00000530927 TREX1Q9NSU2 369 aa18.34■□□□□ 0.53
GMDS-208ENST00000530927 LOXL2Q9Y4K0 774 aa18.34■□□□□ 0.53
GMDS-208ENST00000530927 DNMT3AQ9Y6K1 912 aaPredicted RBP18.34■□□□□ 0.53
GMDS-208ENST00000530927 GOLGA8KD6RF30 607 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 GOLGA8TH3BQL2 631 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 TNFSF15O95150 251 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 F7P08709 466 aaPredicted RBP18.33■□□□□ 0.53
GMDS-208ENST00000530927 ARNTP27540 789 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 PREPP48147 710 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 PRAMEP78395 509 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 TBC1D25Q3MII6 688 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 TMEM26Q6ZUK4 368 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 FBXO39Q8N4B4 442 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 OR4L1Q8NH43 312 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 OR10G6Q8NH81 332 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 WDR36Q8NI36 951 aaKnown RBP18.33■□□□□ 0.53
GMDS-208ENST00000530927 NCSTNQ92542 709 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 CXorf40BQ96DE9 158 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 AHCYL2Q96HN2 611 aaKnown RBP18.33■□□□□ 0.53
GMDS-208ENST00000530927 NAF1Q96HR8 494 aaKnown RBP18.33■□□□□ 0.53
GMDS-208ENST00000530927 ZNF514Q96K75 400 aaPredicted RBP18.33■□□□□ 0.53
GMDS-208ENST00000530927 LINC00615Q96LM1 132 aaPredicted RBP18.33■□□□□ 0.53
GMDS-208ENST00000530927 NRTNQ99748 197 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 IL22Q9GZX6 179 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 STN1Q9H668 368 aaKnown RBP18.33■□□□□ 0.53
GMDS-208ENST00000530927 SLC40A1Q9NP59 571 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 IMP3Q9NV31 184 aaKnown RBP18.33■□□□□ 0.53
GMDS-208ENST00000530927 IL1RAPL1Q9NZN1 696 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 BFARQ9NZS9 450 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 PISDQ9UG56 409 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 KLHL3Q9UH77 587 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 RIMKLBQ9ULI2 386 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 SAR1BQ9Y6B6 198 aa18.33■□□□□ 0.53
GMDS-208ENST00000530927 A8MU76 341 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 CFAP99D6REC4 459 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 PLD2O14939 933 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 PDHA2P29803 388 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 PTGIRP43119 386 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 NPY2RP49146 381 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 LIMK2P53671 638 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 GFERP55789 205 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 BRD3Q15059 726 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 PPP1R7Q15435 360 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 PMEPA1Q969W9 287 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 SLC46A1Q96NT5 459 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 STRADBQ9C0K7 418 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 ANKRD11Q6UB99 2663 aaPredicted RBP18.32■□□□□ 0.52
GMDS-208ENST00000530927 DUX1O43812 170 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 KCNJ13O60928 360 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 THRAP10827 490 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 CCL4P13236 92 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 ITGB6P18564 788 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 HALP42357 657 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 PPP1CAP62136 330 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 GPLD1P80108 840 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 MRPS25P82663 173 aaKnown RBP18.32■□□□□ 0.52
GMDS-208ENST00000530927 CDK16Q00536 496 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 LAMB3Q13751 1172 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 C19orf48Q6RUI8 117 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 NAT8LQ8N9F0 302 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 OR4D9Q8NGE8 314 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 HM13Q8TCT9 377 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 LKAAEAR1Q8TD35 194 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 GRK7Q8WTQ7 553 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 RSC1A1Q92681 617 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 GRAMD1AQ96CP6 724 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 CRELD1Q96HD1 420 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 C12orf66Q96MD2 445 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 SERPINB12Q96P63 405 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 CCM2Q9BSQ5 444 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 KIFC1Q9BW19 673 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 COG4Q9H9E3 785 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 POT1Q9NUX5 634 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 PCDHGA8Q9Y5G5 932 aa18.32■□□□□ 0.52
GMDS-208ENST00000530927 LILRA5A6NI73 299 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 IQCF5A8MTL0 148 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 BANF1O75531 89 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 DXOO77932 396 aaKnown RBP18.31■□□□□ 0.52
GMDS-208ENST00000530927 UBXN7O94888 489 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 MTHFD1P11586 935 aaKnown RBP18.31■□□□□ 0.52
GMDS-208ENST00000530927 ITPKBP27987 946 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 SQSTM1Q13501 440 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 FASTKD1Q53R41 847 aaKnown RBP18.31■□□□□ 0.52
GMDS-208ENST00000530927 RNASEH2BQ5TBB1 312 aaKnown RBP18.31■□□□□ 0.52
GMDS-208ENST00000530927 TMEM71Q6P5X7 295 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 PACS1Q6VY07 963 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 NLRP9Q7RTR0 991 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 KIF18AQ8NI77 898 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 HEXDCQ8WVB3 486 aa18.31■□□□□ 0.52
GMDS-208ENST00000530927 HNRNPLLQ8WVV9 542 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms