RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 HTATIP2Q9BUP3 242 aa16.96■□□□□ 0.31
BRCA2-204ENST00000530893 C1orf50Q9BV19 199 aa16.96■□□□□ 0.31
BRCA2-204ENST00000530893 LRRC3Q9BY71 257 aa16.96■□□□□ 0.31
BRCA2-204ENST00000530893 TM6SF2Q9BZW4 377 aa16.96■□□□□ 0.31
BRCA2-204ENST00000530893 RNF11Q9Y3C5 154 aa16.96■□□□□ 0.31
BRCA2-204ENST00000530893 OBSL1O75147 1896 aa16.96■□□□□ 0.31
BRCA2-204ENST00000530893 SCN8AQ9UQD0 1980 aa16.96■□□□□ 0.31
BRCA2-204ENST00000530893 C1orf232A0A0U1RR37 186 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 LSM1O15116 133 aaKnown RBP16.96■□□□□ 0.3
BRCA2-204ENST00000530893 ACRV1P26436 265 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 SLC5A9Q2M3M2 681 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 GRAMD4Q6IC98 578 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 NANOGP8Q6NSW7 305 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 MACC1Q6ZN28 852 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 DEFB128Q7Z7B8 93 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 KIAA2013Q8IYS2 634 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 ARL14EPQ8N8R7 260 aaPredicted RBP16.96■□□□□ 0.3
BRCA2-204ENST00000530893 OR4F6Q8NGB9 312 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 WFDC5Q8TCV5 224 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 TFAP2CQ92754 450 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 PPP3R2Q96LZ3 170 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 SLC22A12Q96S37 553 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 ATP13A3Q9H7F0 1226 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 IPPKQ9H8X2 491 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 NANOGQ9H9S0 305 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 IL26Q9NPH9 171 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 DUS2Q9NX74 493 aaKnown RBP16.96■□□□□ 0.3
BRCA2-204ENST00000530893 DMTF1Q9Y222 760 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 MYRFQ9Y2G1 1151 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 CPQQ9Y646 472 aa16.96■□□□□ 0.3
BRCA2-204ENST00000530893 COL4A6Q14031 1691 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 A0A0U1RQS6 177 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 ARHGAP10A1A4S6 786 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 GPR39O43194 453 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 CKMT2P17540 419 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 JAK1P23458 1154 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 CCT8P50990 548 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 LSAMPQ13449 338 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 CDKN3Q16667 212 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 CYP51A1Q16850 503 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 NADK2Q4G0N4 442 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 TIGD2Q4W5G0 525 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 RABL3Q5HYI8 236 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 TMTC4Q5T4D3 741 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 SULT1C3Q6IMI6 304 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 CNKSR3Q6P9H4 555 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 SCIMPQ6UWF3 145 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 TBC1D21Q8IYX1 336 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 SFRP1Q8N474 314 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 HM13Q8TCT9 377 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 CDK15Q96Q40 435 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 LYSMD1Q96S90 227 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 IL21Q9HBE4 155 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 LATS2Q9NRM7 1088 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 PTTG2Q9NZH5 202 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 THEGQ9P2T0 379 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 EVLQ9UI08 416 aaPredicted RBP16.95■□□□□ 0.3
BRCA2-204ENST00000530893 ANKRD12Q6UB98 2062 aa16.95■□□□□ 0.3
BRCA2-204ENST00000530893 GLYATL1P3A0A0U1RQE8 302 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 TCRBV5S2A0A599 114 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 K7ERQ8 282 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 SOCS2O14508 198 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 IGSF6O95976 241 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 IL12AP29459 219 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 HMOX2P30519 316 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 SPAM1P38567 509 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 ARL1P40616 181 aaPredicted RBP16.94■□□□□ 0.3
BRCA2-204ENST00000530893 TRAF3Q13114 568 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 MAD2L1Q13257 205 aaPredicted RBP16.94■□□□□ 0.3
BRCA2-204ENST00000530893 MAP7Q14244 749 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 TTLL9Q3SXZ7 439 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 MPPE1Q53F39 396 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 HTR3DQ70Z44 454 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 MILR1Q7Z6M3 343 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 GPR65Q8IYL9 337 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 APCDD1Q8J025 514 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 ZBTB2Q8N680 514 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 METTL25Q8N6Q8 603 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 TSPAN14Q8NG11 270 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 UBTD2Q8WUN7 234 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 ISG20Q96AZ6 181 aaKnown RBP16.94■□□□□ 0.3
BRCA2-204ENST00000530893 RDH14Q9HBH5 336 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 ZNF334Q9HCZ1 680 aaPredicted RBP16.94■□□□□ 0.3
BRCA2-204ENST00000530893 MRPL17Q9NRX2 175 aaKnown RBP16.94■□□□□ 0.3
BRCA2-204ENST00000530893 ABCB8Q9NUT2 735 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 KIAA1522Q9P206 1035 aaPredicted RBP16.94■□□□□ 0.3
BRCA2-204ENST00000530893 KLHL42Q9P2K6 505 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 AGAP14A8MT82 685 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 INPP4BO15327 924 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 WDR47O94967 919 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 SLC25A14O95258 325 aaPredicted RBP16.94■□□□□ 0.3
BRCA2-204ENST00000530893 ATP6V1B1P15313 513 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 SERPINA4P29622 427 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 HNF1BP35680 557 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 APLP1P51693 650 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 YBX1P67809 324 aaKnown RBP16.94■□□□□ 0.3
BRCA2-204ENST00000530893 TUBA4AP68366 448 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 ZXDBP98169 803 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 NR6A1Q15406 480 aa16.94■□□□□ 0.3
BRCA2-204ENST00000530893 GPRC6AQ5T6X5 926 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms