RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 SCN3BQ9NY72 215 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 COL20A1Q9P218 1284 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 CACNG2Q9Y698 323 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 PRR23AA6NEV1 266 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 STX16O14662 325 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 MT-ND2P03891 347 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 CYP11A1P05108 521 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 PCSK2P16519 638 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 TNNI3P19429 210 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 CAPN3P20807 821 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 MAPKAPK2P49137 400 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 CLK1P49759 484 aaKnown RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 GBX2P52951 348 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 PER3P56645 1201 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 GRIK2Q13002 908 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 HKDC1Q2TB90 917 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 CLLU1Q5K131 121 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 TYW3Q6IPR3 259 aaKnown RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 TMEM81Q6P7N7 255 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 UTS2BQ765I0 119 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 STK32CQ86UX6 486 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 C4orf19Q8IY42 314 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 FSTL5Q8N475 847 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 C3orf58Q8NDZ4 430 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 OR52E4Q8NGH9 312 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 VANGL1Q8TAA9 524 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-214ENST00000530886 CCDC126Q96EE4 140 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 SAMD11Q96NU1 681 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 WDFY2Q96P53 400 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 CATSPERBQ9H7T0 1116 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 ZC4H2Q9NQZ6 224 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 FAM105AQ9NUU6 356 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 TLK1Q9UKI8 766 aa8.03□□□□□ -1.12
CSDE1-214ENST00000530886 ZNF98A6NK75 572 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 FAM170BA6NMN3 283 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 HACD1B0YJ81 288 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 ACSL4O60488 711 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 PLA2G6O60733 806 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 BTF3P20290 206 aaKnown RBP8.02□□□□□ -1.12
CSDE1-214ENST00000530886 DDCP20711 480 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 YWHABP31946 246 aaKnown RBP8.02□□□□□ -1.12
CSDE1-214ENST00000530886 TGFBR1P36897 503 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 CTSKP43235 329 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 CSNK2BP67870 215 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 LIPEQ05469 1076 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 EN1Q05925 392 aaPredicted RBP8.02□□□□□ -1.12
CSDE1-214ENST00000530886 IER5Q5VY09 327 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 SULT1C3Q6IMI6 304 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 APOBEC3HQ6NTF7 200 aaKnown RBP8.02□□□□□ -1.12
CSDE1-214ENST00000530886 CENPLQ8N0S6 344 aaPredicted RBP8.02□□□□□ -1.12
CSDE1-214ENST00000530886 ACVR1CQ8NER5 493 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 OR9I1Q8NGQ6 314 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 FANK1Q8TC84 345 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 NSUN6Q8TEA1 469 aaKnown RBP8.02□□□□□ -1.12
CSDE1-214ENST00000530886 FERD3LQ96RJ6 166 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 TBCBQ99426 244 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 SPATA9Q9BWV2 254 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 SLC6A15Q9H2J7 730 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 RC3H2Q9HBD1 1191 aaKnown RBP8.02□□□□□ -1.12
CSDE1-214ENST00000530886 SLC23A1Q9UHI7 598 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 NUDT5Q9UKK9 219 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 RNF6Q9Y252 685 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 PRELID3BQ9Y3B1 194 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 FKBP7Q9Y680 259 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 PLXNA1Q9UIW2 1896 aa8.02□□□□□ -1.12
CSDE1-214ENST00000530886 A0A0A0MRY4 1105 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 A0A0B4J293 547 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ZCWPW2A0A1B0GU75 182 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 A0A1W2PRG6 482 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 TUBAL3A6NHL2 446 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 I3L521 148 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 PAPSS2O95340 614 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 PIGRP01833 764 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 HMGCRP04035 888 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ALDOCP09972 364 aaKnown RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 SLC35E2BP0CK96 405 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ZNF250P15622 560 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 FSHRP23945 695 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 TRIM23P36406 574 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 SLC12A2P55011 1212 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 GRAPQ13588 217 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ZNF273Q14593 569 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 SETMARQ53H47 684 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 IGSF11Q5DX21 431 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 SH3PXD2AQ5TCZ1 1133 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 CASC4Q6P4E1 433 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 TEX261Q6UWH6 196 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 TFAP2EQ6VUC0 442 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 SLC46A3Q7Z3Q1 461 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 CDH24Q86UP0 819 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 TMEM151BQ8IW70 566 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 C9orf62Q8N4C0 152 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 AADATQ8N5Z0 425 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ZNF366Q8N895 744 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 OR7G3Q8NG95 312 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 PCDH19Q8TAB3 1148 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 WDR48Q8TAF3 677 aa8.02□□□□□ -1.13
CSDE1-214ENST00000530886 GRAPLQ8TC17 118 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 ISG20Q96AZ6 181 aaKnown RBP8.02□□□□□ -1.13
CSDE1-214ENST00000530886 TBC1D20Q96BZ9 403 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms