RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 COG2Q14746 738 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 LETM2Q2VYF4 491 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 GAGE2EQ4V326 116 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 SETMARQ53H47 684 aaPredicted RBP4.45□□□□□ -1.7
C11orf88-204ENST00000529661 KRTCAP3Q53RY4 240 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 KCNT1Q5JUK3 1230 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 ZDHHC20Q5W0Z9 365 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 GAGE2AQ6NT46 116 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 WDR73Q6P4I2 378 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 TEX38Q6PEX7 206 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 FAM198BQ6UWH4 519 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 GALNTL5Q7Z4T8 443 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 CUZD1Q86UP6 607 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 GALNT13Q8IUC8 556 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 ZNF34Q8IZ26 560 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 OR5R1Q8NH85 324 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 HMGCLL1Q8TB92 370 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 THAP6Q8TBB0 222 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 TBC1D16Q8TBP0 767 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 TEKT4Q8WW24 435 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 DNAAF4Q8WXU2 420 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 SPACA9Q96E40 222 aaPredicted RBP4.45□□□□□ -1.7
C11orf88-204ENST00000529661 SPATA17Q96L03 361 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 SMC6Q96SB8 1091 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 CSF3RQ99062 836 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 CMKLR1Q99788 373 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 ADPGKQ9BRR6 497 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 NAA11Q9BSU3 229 aaPredicted RBP4.45□□□□□ -1.7
C11orf88-204ENST00000529661 HGH1Q9BTY7 390 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 NOX4Q9NPH5 578 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 PIH1D3Q9NQM4 214 aaKnown RBP4.45□□□□□ -1.7
C11orf88-204ENST00000529661 TXLNGQ9NUQ3 528 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 TAS2R14Q9NYV8 317 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 RCC2Q9P258 522 aaKnown RBP4.45□□□□□ -1.7
C11orf88-204ENST00000529661 GAGE2DQ9UEU5 116 aa4.45□□□□□ -1.7
C11orf88-204ENST00000529661 TRIP12Q14669 1992 aaPredicted RBP4.45□□□□□ -1.7
C11orf88-204ENST00000529661 A0A1W2PP11 408 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 TMEM189-UBE2V1I3L0A0 370 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 PRAMEF11O60813 436 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 RFPL2O75678 378 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 RECQL5O94762 991 aaPredicted RBP4.44□□□□□ -1.7
C11orf88-204ENST00000529661 LINGO3P0C6S8 592 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 VPREB1P12018 145 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 KCNA5P22460 613 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 PTAFRP25105 342 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 MC5RP33032 325 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 RAB28P51157 221 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 KRT83P78385 493 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 UBE2V1Q13404 147 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 CAMK2DQ13557 499 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 MELKQ14680 651 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 OASLQ15646 514 aaKnown RBP4.44□□□□□ -1.7
C11orf88-204ENST00000529661 ZNF672Q499Z4 452 aaPredicted RBP4.44□□□□□ -1.7
C11orf88-204ENST00000529661 ARMC4Q5T2S8 1044 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 FAM47EQ6ZV65 393 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 GLRX5Q86SX6 157 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 IQCHQ86VS3 1027 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 SLC5A8Q8N695 610 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 PI4KAP1Q8N8J0 262 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 ACVR1CQ8NER5 493 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 SPATA20Q8TB22 786 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 UTP15Q8TED0 518 aaKnown RBP4.44□□□□□ -1.7
C11orf88-204ENST00000529661 DNASE2BQ8WZ79 361 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 HDAC11Q96DB2 347 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 ERLEC1Q96DZ1 483 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 BICD1Q96G01 975 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 FER1L6-AS2Q96M78 137 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 IL17FQ96PD4 163 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 MTERF1Q99551 399 aaKnown RBP4.44□□□□□ -1.7
C11orf88-204ENST00000529661 ALDH8A1Q9H2A2 487 aaPredicted RBP4.44□□□□□ -1.7
C11orf88-204ENST00000529661 ANKZF1Q9H8Y5 726 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 MRGBPQ9NV56 204 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 C1RLQ9NZP8 487 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 B3GALT5Q9Y2C3 310 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 KLHL20Q9Y2M5 609 aa4.44□□□□□ -1.7
C11orf88-204ENST00000529661 MAGEA13PA6NCF6 341 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 HEPACAM2A8MVW5 462 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 TO15178 435 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 IPO8O15397 1037 aaKnown RBP4.43□□□□□ -1.7
C11orf88-204ENST00000529661 ZBTB43O43298 467 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 TOMM70O94826 608 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 KDM4BO94953 1096 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 TRUB2O95900 331 aaKnown RBP4.43□□□□□ -1.7
C11orf88-204ENST00000529661 ERCC2P18074 760 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 CTSCP53634 463 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 TERF1P54274 439 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 BRWD1-AS2P59051 145 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 PDE1BQ01064 536 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 POU3F1Q03052 451 aaPredicted RBP4.43□□□□□ -1.7
C11orf88-204ENST00000529661 HYAL1Q12794 435 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 RALGDSQ12967 914 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 RAB6CQ53S08 254 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 KRBOX4Q5JUW0 171 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 C9orf50Q5SZB4 431 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 C6orf163Q5TEZ5 329 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 WBP2NLQ6ICG8 309 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 TMEM211Q6ICI0 200 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 RGMBQ6NW40 437 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 DCLRE1AQ6PJP8 1040 aa4.43□□□□□ -1.7
C11orf88-204ENST00000529661 GPR180Q86V85 440 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms