RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.37□□□□□ -1.073e-6■■■□□ 16.8
SSBP3-212ENST00000528930 CAPN6Q9Y6Q1 641 aa8.37□□□□□ -1.07
SSBP3-212ENST00000528930 CPED1A4D0V7 1026 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 RGSL1A5PLK6 1076 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 GOLGA6CA6NDK9 693 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 GOLGA6BA6NDN3 693 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 FADS2P1A8MWK0 482 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 GOLGA6L6A8MZA4 724 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 MIF4GDA9UHW6 222 aaKnown RBP8.36□□□□□ -1.07
SSBP3-212ENST00000528930 C9orf172C9J069 976 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 AURKAO14965 403 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 PMPCBO75439 489 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 NDST3O95803 873 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 FTCDO95954 541 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 EPOP01588 193 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 PIRTP0C851 137 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 GOLGA6DP0CG33 693 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 RBP3P10745 1247 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 CD1EP15812 388 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 CD33P20138 364 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 CCKBRP32239 447 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 GATA4P43694 442 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 GSDMDP57764 484 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 KLF1Q13351 362 aaPredicted RBP8.36□□□□□ -1.07
SSBP3-212ENST00000528930 SPIDRQ14159 915 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 TLR1Q15399 786 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 NR0B2Q15466 257 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 PCSK7Q16549 785 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 HENMT1Q5T8I9 393 aaKnown RBP8.36□□□□□ -1.07
SSBP3-212ENST00000528930 TRIM74Q86UV6 250 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 GKN2Q86XP6 184 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 SFTPA2Q8IWL1 248 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 TXLNBQ8N3L3 684 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 RNF10Q8N5U6 811 aaKnown RBP8.36□□□□□ -1.07
SSBP3-212ENST00000528930 GPR26Q8NDV2 337 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 GPR156Q8NFN8 814 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 GPBAR1Q8TDU6 330 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 NKD1Q969G9 470 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 HES6Q96HZ4 224 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 FAM118BQ9BPY3 351 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 FAM83DQ9H4H8 585 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 CARS2Q9HA77 564 aaKnown RBP8.36□□□□□ -1.07
SSBP3-212ENST00000528930 ZFYVE1Q9HBF4 777 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 EPB41L5Q9HCM4 733 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 TRNAU1APQ9NX07 287 aaKnown RBP8.36□□□□□ -1.07
SSBP3-212ENST00000528930 GOLGA6AQ9NYA3 693 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 PKD2L2Q9NZM6 624 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 KLHL8Q9P2G9 620 aaPredicted RBP8.36□□□□□ -1.07
SSBP3-212ENST00000528930 FAM153AQ9UHL3 310 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 MOSPD1Q9UJG1 213 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 PADI4Q9UM07 663 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 SUFUQ9UMX1 484 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 SHOC2Q9UQ13 582 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 TMEM98Q9Y2Y6 226 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 SPO11Q9Y5K1 396 aa8.36□□□□□ -1.07
SSBP3-212ENST00000528930 PCYT1BQ9Y5K3 369 aaPredicted RBP8.36□□□□□ -1.07
SSBP3-212ENST00000528930 OAS3Q9Y6K5 1087 aaKnown RBP8.36□□□□□ -1.07
SSBP3-212ENST00000528930 PRRC2CQ9Y520 2896 aaKnown RBP8.36□□□□□ -1.07
SSBP3-212ENST00000528930 F5H423 210 aaPredicted RBP8.35□□□□□ -1.07
SSBP3-212ENST00000528930 TMX2-CTNND1H3BSU7 103 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 H7C0C1 242 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 TJP3O95049 919 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 PTMAP06454 111 aaKnown RBP8.35□□□□□ -1.07
SSBP3-212ENST00000528930 PYGLP06737 847 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 IVLP07476 585 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 JMJD7P0C870 316 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 ITIH1P19827 911 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 ITGA3P26006 1051 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 ETV5P41161 510 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 GNPDA1P46926 289 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 ATP5OP48047 213 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 WNT3AP56704 352 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 EIF3EP60228 445 aaKnown RBP8.35□□□□□ -1.07
SSBP3-212ENST00000528930 CDC20Q12834 499 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 MPP3Q13368 585 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 SEPT6Q14141 434 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 SIRPB2Q5JXA9 342 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 ANKRD20A2Q5SQ80 823 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 CCDC181Q5TID7 509 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 ANKRD20A1Q5TYW2 823 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 ANKRD20A3Q5VUR7 823 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 ASB18Q6ZVZ8 466 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 TAF8Q7Z7C8 310 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 LRRC8AQ8IWT6 810 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 UBL4BQ8N7F7 174 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 ARL10Q8N8L6 244 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 KYQ8NBH2 561 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 CCHCR1Q8TD31 782 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 SCG3Q8WXD2 468 aaKnown RBP8.35□□□□□ -1.07
SSBP3-212ENST00000528930 GLMNQ92990 594 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 SLC45A3Q96JT2 553 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 SLC29A3Q9BZD2 475 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 STRADBQ9C0K7 418 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 SPATS2LQ9NUQ6 558 aaKnown RBP8.35□□□□□ -1.07
SSBP3-212ENST00000528930 SIRPGQ9P1W8 387 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 NFKBIL1Q9UBC1 381 aaPredicted RBP8.35□□□□□ -1.07
SSBP3-212ENST00000528930 GULP1Q9UBP9 304 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 TRHDEQ9UKU6 1024 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 GPR34Q9UPC5 381 aa8.35□□□□□ -1.07
SSBP3-212ENST00000528930 DOLKQ9UPQ8 538 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms