RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 RFXANKO14593 260 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 TRBC1P01850 177 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 KCNA5P22460 613 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 AP1S2P56377 157 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 CSTF3Q12996 717 aaKnown RBP14.87□□□□□ -0.03
USP47-207ENST00000527733 ANXA8L1Q5VT79 327 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 NAPRTQ6XQN6 538 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 LRRTM4Q86VH4 590 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 KRT73Q86Y46 540 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 ZDHHC14Q8IZN3 488 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 AADATQ8N5Z0 425 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 USP7Q93009 1102 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 CCM2Q9BSQ5 444 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 CARS2Q9HA77 564 aaKnown RBP14.87□□□□□ -0.03
USP47-207ENST00000527733 MTMR10Q9NXD2 777 aa14.87□□□□□ -0.03
USP47-207ENST00000527733 BBIP1A8MTZ0 92 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 K7ERQ8 282 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 TRIM38O00635 465 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 SIN3BO75182 1162 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 ADH1BP00325 375 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 CD70P32970 193 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 ACTR1BP42025 376 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 INPP1P49441 399 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 ACTR1AP61163 376 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 HERVK_113P63132 956 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 GCNT7Q6ZNI0 430 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 CYS1Q717R9 158 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 PPCDCQ96CD2 204 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 ITCHQ96J02 903 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 ERVK-6Q9BXR3 956 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 ARL8BQ9NVJ2 186 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 PCDHGA11Q9Y5H2 935 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 LCHNA4D1U4 455 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 TULP3O75386 442 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 SRPRAP08240 638 aaKnown RBP14.86□□□□□ -0.03
USP47-207ENST00000527733 ACP5P13686 325 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 EPORP19235 508 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 CMPK1P30085 196 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 HNF1BP35680 557 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 GSTA3Q16772 222 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 ERN2Q76MJ5 926 aaKnown RBP14.86□□□□□ -0.03
USP47-207ENST00000527733 PIM3Q86V86 326 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 CNTD1Q8N815 330 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 KCNJ9Q92806 393 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 TPD52L3Q96J77 140 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 PAK6Q9NQU5 681 aaPredicted RBP14.86□□□□□ -0.03
USP47-207ENST00000527733 ITM2CQ9NQX7 267 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 TBX21Q9UL17 535 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 PRPF19Q9UMS4 504 aaKnown RBP14.86□□□□□ -0.03
USP47-207ENST00000527733 HCFC2Q9Y5Z7 792 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 WASH4PA8MWX3 477 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 SCAMP1O15126 338 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 POP7O75817 140 aaKnown RBP14.86□□□□□ -0.03
USP47-207ENST00000527733 PCSK2P16519 638 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 RXRGP48443 463 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 MRPS22P82650 360 aaKnown RBP14.86□□□□□ -0.03
USP47-207ENST00000527733 IL23RQ5VWK5 629 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 TRNP1Q6NT89 227 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 TTC33Q6PID6 262 aaPredicted RBP14.86□□□□□ -0.03
USP47-207ENST00000527733 RAB7BQ96AH8 199 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 TTLL2Q9BWV7 592 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 KRCC1Q9NPI7 259 aaPredicted RBP14.86□□□□□ -0.03
USP47-207ENST00000527733 GDE1Q9NZC3 331 aa14.86□□□□□ -0.03
USP47-207ENST00000527733 SAC3D1A6NKF1 404 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 DRGXA6NNA5 263 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 KRT75O95678 551 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 ASMTP46597 345 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 LSM12Q3MHD2 195 aaKnown RBP14.85□□□□□ -0.03
USP47-207ENST00000527733 ENPP7Q6UWV6 458 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 PRR23CQ6ZRP0 262 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 RANBP9Q96S59 729 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 RTKNQ9BST9 563 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 SLC46A2Q9BY10 475 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 RPS6KB2Q9UBS0 482 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 CORO2BQ9UQ03 480 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 HEBP2Q9Y5Z4 205 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 A8MT66 165 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 ECI2O75521 394 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 CBSLP0DN79 551 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 ADSLP30566 484 aaPredicted RBP14.85□□□□□ -0.03
USP47-207ENST00000527733 CBSP35520 551 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 KCNJ2P63252 427 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 ALDH6A1Q02252 535 aaKnown RBP14.85□□□□□ -0.03
USP47-207ENST00000527733 TEAD4Q15561 434 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 BHLHE22Q8NFJ8 381 aaPredicted RBP14.85□□□□□ -0.03
USP47-207ENST00000527733 FCRL3Q96P31 734 aaPredicted RBP14.85□□□□□ -0.03
USP47-207ENST00000527733 MCCC1Q96RQ3 725 aaPredicted RBP14.85□□□□□ -0.03
USP47-207ENST00000527733 LINC00597Q9H2U6 94 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 ANAPC2Q9UJX6 822 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 PACSIN3Q9UKS6 424 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 CDH7Q9ULB5 785 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 CITO14578 2027 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 CYP7B1O75881 506 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 LRRC32Q14392 662 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 MPP7Q5T2T1 576 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 CPTPQ5TA50 214 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 TMEM173Q86WV6 379 aaPredicted RBP14.85□□□□□ -0.03
USP47-207ENST00000527733 CPSF7Q8N684 471 aaKnown RBP14.85□□□□□ -0.03
USP47-207ENST00000527733 SORCS1Q8WY21 1168 aa14.85□□□□□ -0.03
USP47-207ENST00000527733 HBEGFQ99075 208 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms