RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ATP6AP1LQ52LC2 224 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 SPOUT1Q5T280 376 aaKnown RBP12.35□□□□□ -0.43
CAPN1-208ENST00000527323 SLC39A5Q6ZMH5 540 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 PDPRQ8NCN5 879 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 KIAA1191Q96A73 305 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 MAGED4Q96JG8 741 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 CSF3RQ99062 836 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 HBEGFQ99075 208 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 RTP3Q9BQQ7 232 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 NEURL2Q9BR09 285 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 AARSD1Q9BTE6 412 aaKnown RBP12.35□□□□□ -0.43
CAPN1-208ENST00000527323 PALMDQ9NP74 551 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 RIC8BQ9NVN3 520 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 MAGEL2Q9UJ55 1249 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 SLC27A5Q9Y2P5 690 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 BPTFQ12830 3046 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 A0A1W2PQH9 124 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 NPEPPSL1A6NEC2 478 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 SOBPA7XYQ1 873 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 G3V2T6 193 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 KPNA4O00629 521 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-208ENST00000527323 NDUFS3O75489 264 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 SULT1C4O75897 302 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 ANXA6P08133 673 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 TCF3P15923 654 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 HOXB8P17481 243 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-208ENST00000527323 IL12AP29459 219 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 TUBA3CQ13748 450 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 SKIV2LQ15477 1246 aaKnown RBP12.35□□□□□ -0.43
CAPN1-208ENST00000527323 ALFQ53S48 1182 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 TTC23Q5W5X9 447 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 UGT3A1Q6NUS8 523 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 SPATA2LQ8IUW3 424 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-208ENST00000527323 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
CAPN1-208ENST00000527323 SPARTQ8N0X7 666 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 BPIFB1Q8TDL5 484 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 ACBD6Q9BR61 282 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 C17orf80Q9BSJ5 609 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 SMOC2Q9H3U7 446 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 NTN4Q9HB63 628 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 BAG5Q9UL15 447 aa12.35□□□□□ -0.43
CAPN1-208ENST00000527323 FAM234BA2RU67 622 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 SYCE1LA8MT33 242 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 ZBBXA8MT70 800 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 ADAM23O75077 832 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 RPP40O75818 363 aaKnown RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 OR4F21O95013 312 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 ENO2P09104 434 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 RAP2AP10114 183 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 UROSP10746 265 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 JUNBP17275 347 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 JAK1P23458 1154 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 CRHBPP24387 322 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 HALP42357 657 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 MLLT10P55197 1068 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 ERVK-8P63133 956 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 ARHGEF6Q15052 776 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 PIK3R6Q5UE93 754 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 AFMIDQ63HM1 303 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 XAF1Q6GPH4 301 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 GLB1LQ6UWU2 654 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 EFL1Q7Z2Z2 1120 aaKnown RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 PIWIL3Q7Z3Z3 882 aaKnown RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 DTWD1Q8N5C7 304 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 ABHD11Q8NFV4 315 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 NUDT8Q8WV74 236 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 ABHD8Q96I13 439 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 CDK15Q96Q40 435 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 NMUR1Q9HB89 426 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 COMMD8Q9NX08 183 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 CD274Q9NZQ7 290 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 LIMD1Q9UGP4 676 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 ZNF639Q9UID6 485 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 TSR3Q9UJK0 312 aaKnown RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 LRFN2Q9ULH4 789 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 PDE10AQ9Y233 779 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 ST14Q9Y5Y6 855 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 COMMD10Q9Y6G5 202 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 H0Y858 1186 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 TOR1BO14657 336 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 XYLBO75191 536 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 OPRL1P41146 370 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 DGKQP52824 942 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 DEFB103AP81534 67 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 SELPLGQ14242 412 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 UPP1Q16831 310 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 RBM48Q5RL73 367 aaKnown RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 C6orf136Q5SQH8 315 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 SCD5Q86SK9 330 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 OR56A4Q8NGH8 313 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 OR10T2Q8NGX3 314 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 OR2T11Q8NH01 316 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 SLC22A17Q8WUG5 538 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 TAMM41Q96BW9 452 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 FAM193BQ96PV7 902 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 THUMPD3Q9BV44 507 aaKnown RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 FUNDC2Q9BWH2 189 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 ZYG11BQ9C0D3 744 aa12.34□□□□□ -0.43
CAPN1-208ENST00000527323 GPN2Q9H9Y4 310 aaPredicted RBP12.34□□□□□ -0.43
CAPN1-208ENST00000527323 TLR9Q9NR96 1032 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms