RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 THEGQ9P2T0 379 aa2.24□□□□□ -2.05
ECHDC1-219ENST00000526299 CNOT8Q9UFF9 292 aaKnown RBP2.24□□□□□ -2.05
ECHDC1-219ENST00000526299 GJD2Q9UKL4 321 aa2.24□□□□□ -2.05
ECHDC1-219ENST00000526299 MAU2Q9Y6X3 613 aa2.24□□□□□ -2.05
ECHDC1-219ENST00000526299 MYH15Q9Y2K3 1946 aa2.24□□□□□ -2.05
ECHDC1-219ENST00000526299 CCDC194A0A1B0GVG4 234 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 SOCS3O14543 225 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 BCL2L11O43521 198 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 GCNT3O95395 438 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 GRK6P43250 576 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 CTCFP49711 727 aaPredicted RBP2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 CCR5P51681 352 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 MORC3Q14149 939 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 HLA-BQ31612 363 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 RNF212Q495C1 297 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 CXorf66Q5JRM2 361 aaPredicted RBP2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 TSSK4Q6SA08 328 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 DENND5BQ6ZUT9 1274 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 GPALPP1Q8IXQ4 340 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 DCLK2Q8N568 766 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 PSPC1Q8WXF1 523 aaKnown RBP2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 NSL1Q96IY1 281 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 FUCA2Q9BTY2 467 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 RPP25Q9BUL9 199 aaKnown RBP2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 DGCR6LQ9BY27 220 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 TMEM39BQ9GZU3 492 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 MAGIXQ9H6Y5 334 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 PANK3Q9H999 370 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 BRF2Q9HAW0 419 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 OLFML3Q9NRN5 406 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 FLRT3Q9NZU0 649 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 UBA2Q9UBT2 640 aaPredicted RBP2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 MUTYHQ9UIF7 546 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 INTS6Q9UL03 887 aaKnown RBP2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 B3GALT5Q9Y2C3 310 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 CLIC4Q9Y696 253 aa2.23□□□□□ -2.05
ECHDC1-219ENST00000526299 A0A1W2PQM1 296 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 OR2M5A3KFT3 312 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 EPM2AB3EWF7 344 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 EIF3CLB5ME19 914 aaKnown RBP2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 ATP2A1O14983 1001 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 PLPP2O43688 288 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 ICAM1P05362 532 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 HRH2P25021 359 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 RBMS1P29558 406 aaKnown RBP2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 MAGEA11P43364 429 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 RPS18P62269 152 aaKnown RBP2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 LGALS3BPQ08380 585 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 GPR17Q13304 367 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 NFATC2Q13469 925 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 DCAF10Q5QP82 559 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 PTAR1Q7Z6K3 402 aaPredicted RBP2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 HOGA1Q86XE5 327 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 Q8N7P7 452 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 OR4C3Q8NH37 302 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 PANK4Q9NVE7 773 aa2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 RCC2Q9P258 522 aaKnown RBP2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 EXO1Q9UQ84 846 aaKnown RBP2.22□□□□□ -2.05
ECHDC1-219ENST00000526299 COL16A1Q07092 1604 aaPredicted RBP2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 IGHV3OR16-10A0A075B7F0 116 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 A0A1W2PPR1 153 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 KANSL1LA0AUZ9 987 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 PHOX2AO14813 284 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 IDH3BO43837 385 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 KHDRBS3O75525 346 aaKnown RBP2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 ABCD1P33897 745 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 HUNKP57058 714 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 GSDMDP57764 484 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 DLK1P80370 383 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 PAX8Q06710 450 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 PRKAA1Q13131 559 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 CORO6Q6QEF8 472 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 FAM198BQ6UWH4 519 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 CCDC190Q86UF4 302 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 CPOQ8IVL8 374 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 ENAHQ8N8S7 591 aaPredicted RBP2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 PRSS33Q8NF86 280 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 ARHGAP45Q92619 1136 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 NSMCE3Q96MG7 304 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 USP28Q96RU2 1077 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 PUS3Q9BZE2 481 aaKnown RBP2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 GPR63Q9BZJ6 419 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 RANBP17Q9H2T7 1088 aaKnown RBP2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 MBNL1Q9NR56 388 aaKnown RBP2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 TUBE1Q9UJT0 475 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 CAMK2AQ9UQM7 478 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 WDR37Q9Y2I8 494 aa2.21□□□□□ -2.06
ECHDC1-219ENST00000526299 SOS1Q07889 1333 aaPredicted RBP2.2□□□□□ -2.06
ECHDC1-219ENST00000526299 MSGN1A6NI15 193 aa2.2□□□□□ -2.06
ECHDC1-219ENST00000526299 J3QR06 171 aa2.2□□□□□ -2.06
ECHDC1-219ENST00000526299 KLF11O14901 512 aa2.2□□□□□ -2.06
ECHDC1-219ENST00000526299 ATP6V0E1O15342 81 aa2.2□□□□□ -2.06
ECHDC1-219ENST00000526299 ZNF217O75362 1048 aa2.2□□□□□ -2.06
ECHDC1-219ENST00000526299 PAFAH1B1P43034 410 aa2.2□□□□□ -2.06
ECHDC1-219ENST00000526299 PSMC4P43686 418 aa2.2□□□□□ -2.06
ECHDC1-219ENST00000526299 GPR68Q15743 365 aa2.2□□□□□ -2.06
ECHDC1-219ENST00000526299 NAA35Q5VZE5 725 aa2.2□□□□□ -2.06
ECHDC1-219ENST00000526299 SEL1L3Q68CR1 1132 aa2.2□□□□□ -2.06
ECHDC1-219ENST00000526299 TBC1D1Q86TI0 1168 aaPredicted RBP2.2□□□□□ -2.06
ECHDC1-219ENST00000526299 ZNF554Q86TJ5 538 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms