RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 KPNA2P52292 529 aaKnown RBP13.94□□□□□ -0.18
CPSF1-201ENST00000526271 ITGA1P56199 1179 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 ZBED6P86452 979 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 AP1B1Q10567 949 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 PRKD1Q15139 912 aaPredicted RBP13.94□□□□□ -0.18
CPSF1-201ENST00000526271 SLC14A2Q15849 920 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 PLEKHS1Q5SXH7 462 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 ATCAYQ86WG3 371 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 TRAPPC5Q8IUR0 188 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 RBMXL3Q8N7X1 1067 aaKnown RBP13.94□□□□□ -0.18
CPSF1-201ENST00000526271 SIDT2Q8NBJ9 832 aaKnown RBP13.94□□□□□ -0.18
CPSF1-201ENST00000526271 UBXN4Q92575 508 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 DOCK10Q96BY6 2186 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 CXorf40BQ96DE9 158 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 ZDHHC12Q96GR4 267 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 TCTN2Q96GX1 697 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 OXNAD1Q96HP4 312 aaPredicted RBP13.94□□□□□ -0.18
CPSF1-201ENST00000526271 MRGPRX2Q96LB1 330 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 NUDT9Q9BW91 350 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 TRIM5Q9C035 493 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 CHST8Q9H2A9 424 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 CTTNBP2NLQ9P2B4 639 aa13.94□□□□□ -0.18
CPSF1-201ENST00000526271 PCDHGA9Q9Y5G4 932 aaKnown RBP13.94□□□□□ -0.18
CPSF1-201ENST00000526271 BZW2Q9Y6E2 419 aaKnown RBP13.94□□□□□ -0.18
CPSF1-201ENST00000526271 LRRD1A4D1F6 860 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 OR2AG2A6NM03 316 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 ZNF487B1APH4 448 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 F5H423 210 aaPredicted RBP13.93□□□□□ -0.18
CPSF1-201ENST00000526271 TPM3P06753 285 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 PECAM1P16284 738 aaPredicted RBP13.93□□□□□ -0.18
CPSF1-201ENST00000526271 RORAP35398 523 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 HMGCLP35914 325 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 CCL11P51671 97 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 TAZQ16635 292 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 TEX44Q53QW1 395 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 SIRPB2Q5JXA9 342 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 GPRC6AQ5T6X5 926 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 FAM198BQ6UWH4 519 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 FAM151BQ6UXP7 276 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 RBM12BQ8IXT5 1001 aaKnown RBP13.93□□□□□ -0.18
CPSF1-201ENST00000526271 DDHD1Q8NEL9 900 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 FDCSPQ8NFU4 85 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 C19orf60Q96EN9 201 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 TEKT5Q96M29 485 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 FCRL4Q96PJ5 515 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 SLC25A23Q9BV35 468 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 ING2Q9H160 280 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 GRPEL1Q9HAV7 217 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 HYOU1Q9Y4L1 999 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 CROCCQ5TZA2 2017 aa13.93□□□□□ -0.18
CPSF1-201ENST00000526271 A1L4Q6 167 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 TLCD2A6NGC4 264 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 AGFG2O95081 481 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 CLDN1O95832 211 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 CCNYL3P0C7X3 344 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 MTHFD1P11586 935 aaKnown RBP13.92□□□□□ -0.18
CPSF1-201ENST00000526271 LPOP22079 712 aaPredicted RBP13.92□□□□□ -0.18
CPSF1-201ENST00000526271 HNRNPH3P31942 346 aaKnown RBP13.92□□□□□ -0.18
CPSF1-201ENST00000526271 ZNF75DP51815 510 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 WNT3AP56704 352 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 GSE1Q14687 1217 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 LLGL1Q15334 1064 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 INPP5JQ15735 1006 aaPredicted RBP13.92□□□□□ -0.18
CPSF1-201ENST00000526271 EIF2S3LQ2VIR3 472 aaKnown RBP13.92□□□□□ -0.18
CPSF1-201ENST00000526271 METRNLQ641Q3 311 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 ZNF385CQ66K41 422 aaPredicted RBP13.92□□□□□ -0.18
CPSF1-201ENST00000526271 ZNF787Q6DD87 383 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 TMEM220Q6QAJ8 160 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 MFSD7Q6UXD7 560 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 SYVN1Q86TM6 617 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 AMZ2Q86W34 360 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 VSTM4Q8IW00 320 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 ZBTB2Q8N680 514 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 DTX3LQ8TDB6 740 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 SSC4DQ8WTU2 575 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 MRFAP1L1Q96HT8 127 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 RMDN2Q96LZ7 410 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 GPR87Q9BY21 358 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 PDE7BQ9NP56 450 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 UVRAGQ9P2Y5 699 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 FARSAQ9Y285 508 aaKnown RBP13.92□□□□□ -0.18
CPSF1-201ENST00000526271 BTRCQ9Y297 605 aa13.92□□□□□ -0.18
CPSF1-201ENST00000526271 PCM1Q15154 2024 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 DIDO1Q9BTC0 2240 aaKnown RBP13.91□□□□□ -0.18
CPSF1-201ENST00000526271 WIPF3A6NGB9 483 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 MASP2O00187 686 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 HCRTR1O43613 425 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 KRT86O43790 486 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 SCRG1O75711 98 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 MT-ND3P03897 115 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 NFKB1P19838 968 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 PGDP52209 483 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 FOXL2P58012 376 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 TUBB4BP68371 445 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 MSLNQ13421 630 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-201ENST00000526271 OLIG2Q13516 323 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 TUBB2AQ13885 445 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 MESDQ14696 234 aa13.91□□□□□ -0.18
CPSF1-201ENST00000526271 ZNF658BQ4V348 819 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-201ENST00000526271 FHL5Q5TD97 284 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms