RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 IRGCQ6NXR0 463 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 BBS12Q6ZW61 710 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 PRSS42Q7Z5A4 293 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 LRRTM4Q86VH4 590 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 PPP1R3BQ86XI6 285 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 SLC35F6Q8N357 371 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 CCNYQ8ND76 341 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 GPR26Q8NDV2 337 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 CT55Q8WUE5 264 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 ALG3Q92685 438 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 P3H4Q92791 437 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 ZDHHC12Q96GR4 267 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 PBKQ96KB5 322 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 NAP1L3Q99457 506 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 ZSCAN5AQ9BUG6 496 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 ADGRE3Q9BY15 652 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 TRIM55Q9BYV6 548 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 OSBPL8Q9BZF1 889 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 LHX9Q9NQ69 397 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 POT1Q9NUX5 634 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 PADI1Q9ULC6 663 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 VPS4AQ9UN37 437 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 PACSIN2Q9UNF0 486 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 SHOC2Q9UQ13 582 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 PCDHGA6Q9Y5G7 932 aa9.4□□□□□ -0.9
TRAPPC4-206ENST00000525303 DOCK10Q96BY6 2186 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 CTAGE9A4FU28 777 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 OR52A4PA6NMU1 304 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 USP27XA6NNY8 438 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 TTLL8A6PVC2 850 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 APOC4-APOC2K7ER74 178 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 KCNK1O00180 336 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 KMOO15229 486 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 AGFG2O95081 481 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 JCHAINP01591 159 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 APOC2P02655 101 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 MT-ND3P03897 115 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 PYGMP11217 842 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 BRAFP15056 766 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 TCP1P17987 556 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 GNLYP22749 145 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 DRG2P55039 364 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 DCDC1P59894 354 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 PPP1CAP62136 330 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 SLC10A2Q12908 348 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 ZBTB17Q13105 803 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 SEMA5AQ13591 1074 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 KHDC1Q4VXA5 237 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 KAZNQ674X7 775 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 PDPK2PQ6A1A2 396 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 CAPRIN2Q6IMN6 1127 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 ABRAXAS1Q6UWZ7 409 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 ZNF547Q8IVP9 402 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 APLFQ8IW19 511 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 TRAM1L1Q8N609 369 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 PQLC3Q8N755 202 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 EFCAB3Q8N7B9 438 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 PLD5Q8N7P1 536 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 CPT1CQ8TCG5 803 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 KLHL6Q8WZ60 621 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 GLYATL1Q969I3 302 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 HAUS1Q96CS2 278 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 HDAC11Q96DB2 347 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 CXorf40BQ96DE9 158 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 RUFY1Q96T51 708 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 NAPGQ99747 312 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 TIMM29Q9BSF4 260 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 TLR10Q9BXR5 811 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 FRMD8P1Q9BZ68 369 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 ACTL8Q9H568 366 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 PDE7BQ9NP56 450 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 SLC40A1Q9NP59 571 aa9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 PLEKHB1Q9UF11 243 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 DIDO1Q9BTC0 2240 aaKnown RBP9.39□□□□□ -0.91
TRAPPC4-206ENST00000525303 CELSR2Q9HCU4 2923 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 IGHV5-51A0A0C4DH38 117 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 HACD1B0YJ81 288 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 C21orf140B9A014 251 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 VEGFDO43915 354 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 CDK14O94921 469 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 RECKO95980 971 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 BPIP17213 487 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 NELFEP18615 380 aaKnown RBP9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 IDSP22304 550 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 RPS18P62269 152 aaKnown RBP9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 ETF1P62495 437 aaKnown RBP9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 DYNLT1P63172 113 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 XRCC4Q13426 336 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 TUBB3Q13509 450 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 KCNAB1Q14722 419 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 PCSK7Q16549 785 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 FHL5Q5TD97 284 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 AGAP9Q5VTM2 703 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 CPZQ66K79 652 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 PWWP2BQ6NUJ5 590 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 CYB5D1Q6P9G0 228 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 FAM199XQ6PEV8 388 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 TMC3Q7Z5M5 1100 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 CNTD1Q8N815 330 aa9.38□□□□□ -0.91
TRAPPC4-206ENST00000525303 GALNT11Q8NCW6 608 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms