RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 PCDHB14Q9Y5E9 798 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 PCDHGB1Q9Y5G3 927 aa10.07□□□□□ -0.8
SPIDR-224ENST00000524126 COL11A1P12107 1806 aaPredicted RBP10.07□□□□□ -0.8
SPIDR-224ENST00000524126 EEF2KO00418 725 aaKnown RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 PRKCBP05771 671 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 UMPSP11172 480 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 AZGP1P25311 298 aaKnown RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 ASPAP45381 313 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 RGS7P49802 495 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 CSRP3P50461 194 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 NKX3-2P78367 333 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 ZMAT1Q5H9K5 638 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 SHEQ5VZ18 495 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 PIWIL4Q7Z3Z4 852 aaKnown RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 ZC3HC1Q86WB0 502 aaKnown RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 RIOX2Q8IUF8 465 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 DNAAF3Q8N9W5 541 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 LHFPL5Q8TAF8 219 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 HEXDCQ8WVB3 486 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 PCNPQ8WW12 178 aaKnown RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 LPAR1Q92633 364 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.06□□□□□ -0.82e-7■■■■■ 62.8
SPIDR-224ENST00000524126 MSANTD3Q96H12 275 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 UQCC2Q9BRT2 126 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 NAT9Q9BTE0 207 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 LRRC4Q9HBW1 653 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 AGO4Q9HCK5 861 aaKnown RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 INTS7Q9NVH2 962 aaKnown RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 STAP1Q9ULZ2 295 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 KCNH4Q9UQ05 1017 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 ANKRD6Q9Y2G4 727 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 DOCK1Q14185 1865 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 ASPDHA6ND91 283 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 INO80B-WBP1J3KQ70 363 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 PPP6CO00743 305 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 BCKDKO14874 412 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 RECQL5O94762 991 aaPredicted RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 CNTN5O94779 1100 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 DDCP20711 480 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 NMBRP28336 390 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 SDC4P31431 198 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 SLC35A2P78381 396 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 VGLL4Q14135 290 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 SIM2Q14190 667 aaPredicted RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 NKG7Q16617 165 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 FAM83EQ2M2I3 478 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 CLVS2Q5SYC1 327 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 AGAP9Q5VTM2 703 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 ENPP6Q6UWR7 440 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 PTRH1Q86Y79 214 aaKnown RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 TP53INP2Q8IXH6 220 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 C4orf19Q8IY42 314 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 PYROXD2Q8N2H3 581 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 TMEM199Q8N511 208 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 YIPF7Q8N8F6 280 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 ZNF540Q8NDQ6 660 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 TTLQ8NG68 377 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 HERVK_113Q902F9 699 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 REXO5Q96IC2 774 aaKnown RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 NSMCE2Q96MF7 247 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 KCNS3Q9BQ31 491 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 NTPCRQ9BSD7 190 aaKnown RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 POLR3FQ9H1D9 316 aaPredicted RBP10.06□□□□□ -0.8
SPIDR-224ENST00000524126 ERVMER34-1Q9H9K5 563 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 MCCC2Q9HCC0 563 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 SLC23A1Q9UHI7 598 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 ACOT9Q9Y305 439 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 U3KQV3 271 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 PHIPQ8WWQ0 1821 aa10.06□□□□□ -0.8
SPIDR-224ENST00000524126 A0A0B4J293 547 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 LOC110117498-PIK3R3F6TDL0 507 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 UBXN8O00124 270 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 LYPLA2O95372 231 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 CLEC2LP0C7M8 214 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 CCNYL3P0C7X3 344 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 HOXD8P13378 290 aaPredicted RBP10.05□□□□□ -0.8
SPIDR-224ENST00000524126 ITGA2P17301 1181 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 PSMD5Q16401 504 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 NCBP2-AS2Q69YL0 99 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 JADE1Q6IE81 842 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 DENND6AQ8IWF6 608 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 UBE2J2Q8N2K1 259 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 FBXO30Q8TB52 745 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 C19orf60Q96EN9 201 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 RNF31Q96EP0 1072 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 P2RY11Q96G91 374 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 TEX37Q96LM6 180 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 TBATAQ96M53 351 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 LIN7BQ9HAP6 207 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 FBXO40Q9UH90 709 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 TCEAL9Q9UHQ7 104 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 OR2A25A4D2G3 310 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 A8MT66 165 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 PLD2O14939 933 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 ARHGEF9O43307 516 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 MFSD11O43934 449 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 AHSGP02765 367 aa10.05□□□□□ -0.8
SPIDR-224ENST00000524126 ADORA3P0DMS8 318 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms