RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 KATNA1O75449 491 aa18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 PRAMEF1O95521 474 aa18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 APOC2P02655 101 aa18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 XRCC4Q13426 336 aa18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 PWWP2BQ6NUJ5 590 aa18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 DUS1LQ6P1R4 473 aaKnown RBP18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 RANBP10Q6VN20 620 aa18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 SPDYE1Q8NFV5 336 aaPredicted RBP18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 RBM41Q96IZ5 413 aaKnown RBP18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 MAP3K3Q99759 626 aa18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 APOL2Q9BQE5 337 aa18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 WWP1Q9H0M0 922 aa18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 AKIRIN1Q9H9L7 192 aaPredicted RBP18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 IMP3Q9NV31 184 aaKnown RBP18.37■□□□□ 0.53
PTP4A3-206ENST00000524028 H7C0C1 242 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 K7EM74 188 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 SGTAO43765 313 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 EBLN1P0CF75 366 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 MTHFD1P11586 935 aaKnown RBP18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 MSH3P20585 1137 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 ADRA1AP35348 466 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 CASRP41180 1078 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 ATP5OP48047 213 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 GEMP55040 296 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 MSLNQ13421 630 aaPredicted RBP18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 TUBB3Q13509 450 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 TAF1AQ15573 450 aaPredicted RBP18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 IGFBP7Q16270 282 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 COLEC12Q5KU26 742 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 SIDT2Q8NBJ9 832 aaKnown RBP18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 OR4K2Q8NGD2 314 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 UBXN4Q92575 508 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 COL26A1Q96A83 441 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 PDE7BQ9NP56 450 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 LHX9Q9NQ69 397 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 FKBPLQ9UIM3 349 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 ANAPC2Q9UJX6 822 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 PADI1Q9ULC6 663 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 PCDHB3Q9Y5E6 796 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 PCDHGA6Q9Y5G7 932 aa18.36■□□□□ 0.53
PTP4A3-206ENST00000524028 ZNF106Q9H2Y7 1883 aaKnown RBP18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 RCCD1A6NED2 376 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 OR5K3A6NET4 321 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 MGAT4DA6NG13 374 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 ANXA9O76027 345 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 SRP72O76094 671 aaKnown RBP18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 CCNYL3P0C7X3 344 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 NR1D1P20393 614 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 LPOP22079 712 aaPredicted RBP18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 AKT1P31749 480 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 XIAPP98170 497 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 OTUD4Q01804 1114 aaKnown RBP18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 PLCL1Q15111 1095 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 LONRF2Q1L5Z9 754 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 DAAM2Q86T65 1068 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 LILRA3Q8N6C8 439 aaPredicted RBP18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 OR2L2Q8NH16 312 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 ACTL9Q8TC94 416 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 CT55Q8WUE5 264 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 ZNF514Q96K75 400 aaPredicted RBP18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 RUFY1Q96T51 708 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 FAM118BQ9BPY3 351 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 ASB8Q9H765 288 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 FAM8A1Q9UBU6 413 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 RARRES3Q9UL19 164 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 FLNCQ14315 2725 aa18.35■□□□□ 0.53
PTP4A3-206ENST00000524028 CDC14CA4D256 554 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 C2orf81A6NN90 581 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 CREG1O75629 220 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 NTRK1P04629 796 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 PSMB4P28070 264 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 CTNNA1P35221 906 aaKnown RBP18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 COPS2P61201 443 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 FOXK1P85037 733 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 DNASE1L3Q13609 305 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 BCL7AQ4VC05 210 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 LACTB2Q53H82 288 aaPredicted RBP18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 DNTTIP2Q5QJE6 756 aaKnown RBP18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 ANKRD20A2Q5SQ80 823 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 ANKRD20A1Q5TYW2 823 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 ANKRD20A3Q5VUR7 823 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 FAM199XQ6PEV8 388 aaPredicted RBP18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 KLHL35Q6PF15 583 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 SARM1Q6SZW1 724 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 MICALCLQ6ZW33 695 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 CCDC170Q8IYT3 715 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 C12orf66Q96MD2 445 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 FGF21Q9NSA1 209 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 HRASLS2Q9NWW9 162 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 SLC24A2Q9UI40 661 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 KCND3Q9UK17 655 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 TP53TG5Q9Y2B4 290 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 PCDHA3Q9Y5H8 950 aa18.34■□□□□ 0.53
PTP4A3-206ENST00000524028 C5orf60A6NFR6 353 aa18.33■□□□□ 0.52
PTP4A3-206ENST00000524028 AGAP14A8MT82 685 aa18.33■□□□□ 0.52
PTP4A3-206ENST00000524028 MT-ND3P03897 115 aa18.33■□□□□ 0.52
PTP4A3-206ENST00000524028 SEPT6Q14141 434 aa18.33■□□□□ 0.52
PTP4A3-206ENST00000524028 CCDC181Q5TID7 509 aa18.33■□□□□ 0.52
PTP4A3-206ENST00000524028 ITPRIPL1Q6GPH6 555 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms