RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 GABPB2Q8TAK5 448 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-225ENST00000523950 ZFPM2Q8WW38 1151 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 ZNF669Q96BR6 464 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-225ENST00000523950 LRRC39Q96DD0 335 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 CXorf40BQ96DE9 158 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 NXPE2Q96DL1 559 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 STAMBPL1Q96FJ0 436 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 SIGLEC10Q96LC7 697 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 TRIM51Q9BSJ1 452 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 TMEM121BQ9BXQ6 578 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-225ENST00000523950 RAB17Q9H0T7 212 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 SYNDIG1Q9H7V2 258 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 COG4Q9H9E3 785 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 KCNK4Q9NYG8 393 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 VPS9D1Q9Y2B5 631 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 RPS6KL1Q9Y6S9 549 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 SPTBN2O15020 2390 aa12.31□□□□□ -0.44
VEGFA-225ENST00000523950 TRBV23OR9-2A0A075B6M9 112 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 IGHV1OR21-1A0A087WYE8 117 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 FAM149AA5PLN7 773 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 LIN7AO14910 233 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 B4GAT1O43505 415 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 DUX1O43812 170 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 PGAM1P18669 254 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 RPS3P23396 243 aaKnown RBP eCLIP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 ARNTP27540 789 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 RPL10P27635 214 aaKnown RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 NDUFS1P28331 727 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 ALDH4A1P30038 563 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 SLC19A1P41440 591 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 ARCN1P48444 511 aaKnown RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 CD151P48509 253 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 DRG2P55039 364 aaKnown RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 INHBCP55103 352 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 ADARP55265 1226 aaKnown RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 OR1D5P58170 312 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 C2orf54Q08AI8 447 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 CBLBQ13191 982 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 EIF3IQ13347 325 aaKnown RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 SEMA3AQ14563 771 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 RTP5Q14D33 572 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 TYSND1Q2T9J0 566 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 MAP9Q49MG5 647 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 GLIPR1L2Q4G1C9 344 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 ZNF658BQ4V348 819 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 UNQ6494/PRO21346Q6UXR6 183 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 FAM83HQ6ZRV2 1179 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 TMEM26Q6ZUK4 368 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 PIM3Q86V86 326 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 CFAP206Q8IYR0 622 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 CLDN19Q8N6F1 224 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 Q8N9G6 341 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 CALML6Q8TD86 181 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 TMEM159Q96B96 161 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 CCDC97Q96F63 343 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 LIN37Q96GY3 246 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 AHCYL2Q96HN2 611 aaKnown RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 PANX3Q96QZ0 392 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 ERP44Q9BS26 406 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 CARD6Q9BX69 1037 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 STRADBQ9C0K7 418 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 SCHIP1Q9P0W5 487 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 WHRNQ9P202 907 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 ZNF624Q9P2J8 865 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-225ENST00000523950 DKK4Q9UBT3 224 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 GNPTGQ9UJJ9 305 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 PCDHB1Q9Y5F3 818 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 ENTPD2Q9Y5L3 495 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 HEBP2Q9Y5Z4 205 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 MAD1L1Q9Y6D9 718 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 FAM169AQ9Y6X4 670 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 BPTFQ12830 3046 aa12.3□□□□□ -0.44
VEGFA-225ENST00000523950 UQCRHLA0A096LP55 91 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 ZCWPW2A0A1B0GU75 182 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 H3BMM5 538 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 IFRD1O00458 451 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-225ENST00000523950 RAD51CO43502 376 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 NDUFS3O75489 264 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 UQCRHP07919 91 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 MTHFD1P11586 935 aaKnown RBP12.29□□□□□ -0.44
VEGFA-225ENST00000523950 MLLT3P42568 568 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-225ENST00000523950 PDX1P52945 283 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 ITGA8P53708 1063 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 ARL4CP56559 192 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 CLDN6P56747 220 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 DHX9Q08211 1270 aaKnown RBP12.29□□□□□ -0.44
VEGFA-225ENST00000523950 CALCOCO2Q13137 446 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 TRA2AQ13595 282 aaKnown RBP eCLIP12.29□□□□□ -0.442e-8■□□□□ 9.9
VEGFA-225ENST00000523950 CLCA4Q14CN2 919 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 RPE65Q16518 533 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 HIF1AQ16665 826 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 LONRF1Q17RB8 773 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 SPANXN3Q5MJ09 141 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 CAPRIN2Q6IMN6 1127 aaKnown RBP12.29□□□□□ -0.44
VEGFA-225ENST00000523950 NEPROQ6NW34 567 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 CES3Q6UWW8 571 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 OTUD6BQ8N6M0 293 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
VEGFA-225ENST00000523950 MNS1Q8NEH6 495 aa12.29□□□□□ -0.44
VEGFA-225ENST00000523950 OR4D9Q8NGE8 314 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms