RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 LRFN5Q96NI6 719 aa7.75□□□□□ -1.17
NSMCE2-213ENST00000523824 RANBP9Q96S59 729 aa7.75□□□□□ -1.17
NSMCE2-213ENST00000523824 SLC7A5P2Q9GIP4 190 aa7.75□□□□□ -1.17
NSMCE2-213ENST00000523824 ILKAPQ9H0C8 392 aaPredicted RBP7.75□□□□□ -1.17
NSMCE2-213ENST00000523824 MAGEE1Q9HCI5 957 aa7.75□□□□□ -1.17
NSMCE2-213ENST00000523824 LATS2Q9NRM7 1088 aa7.75□□□□□ -1.17
NSMCE2-213ENST00000523824 TMEM63CQ9P1W3 806 aa7.75□□□□□ -1.17
NSMCE2-213ENST00000523824 NFKBIL1Q9UBC1 381 aaPredicted RBP7.75□□□□□ -1.17
NSMCE2-213ENST00000523824 IP6K2Q9UHH9 426 aa7.75□□□□□ -1.17
NSMCE2-213ENST00000523824 MYO6Q9UM54 1294 aa7.75□□□□□ -1.17
NSMCE2-213ENST00000523824 OTOGQ6ZRI0 2925 aa7.75□□□□□ -1.17
NSMCE2-213ENST00000523824 ZNF106Q9H2Y7 1883 aaKnown RBP7.75□□□□□ -1.17
NSMCE2-213ENST00000523824 OR6C74A6NCV1 312 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 LRRC10BA6NIK2 292 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 LRRC53A6NM62 1247 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 DDX3XO00571 662 aaKnown RBP eCLIP7.74□□□□□ -1.174e-6■■■■■ 27.3
NSMCE2-213ENST00000523824 DDX3YO15523 660 aaKnown RBP7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 LRRTM2O43300 516 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 MAP3K7O43318 606 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 MMP2P08253 660 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 BPIP17213 487 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 CYP2A7P20853 494 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 OTX2P32243 289 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 PER3P56645 1201 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 SLC25A11Q02978 314 aaKnown RBP7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 ADCY2Q08462 1091 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 KLHL30Q0D2K2 578 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 XRCC4Q13426 336 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 DPYSL3Q14195 570 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 HADHQ16836 314 aaKnown RBP7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 ATP13A5Q4VNC0 1218 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 CCDC183Q5T5S1 534 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 PRAMEF17Q5VTA0 474 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 HGSNATQ68CP4 663 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 SP5Q6BEB4 398 aaPredicted RBP7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 CCDC70Q6NSX1 233 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 FBXO38Q6PIJ6 1188 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 ZADH2Q8N4Q0 377 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 KCTD6Q8NC69 237 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 FAM71BQ8TC56 605 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 FER1L6-AS2Q96M78 137 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 VPS35Q96QK1 796 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 TLR10Q9BXR5 811 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 XPO4Q9C0E2 1151 aaKnown RBP7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 RUBCNLQ9H714 662 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 ACTR5Q9H9F9 607 aaPredicted RBP7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 BPIFA1Q9NP55 256 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 AGPAT4Q9NRZ5 378 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 IMP3Q9NV31 184 aaKnown RBP7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 PADI2Q9Y2J8 665 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 ZNF711Q9Y462 761 aa7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 CFAP20Q9Y6A4 193 aaKnown RBP7.74□□□□□ -1.17
NSMCE2-213ENST00000523824 APCP25054 2843 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 SLC9B1P1A6NJY1 282 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 TMEM150CB9EJG8 249 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 C9J4A7 227 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 MYO1FO00160 1098 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 KCNK1O00180 336 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 PEX12O00623 359 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 LDB2O43679 373 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 IPO13O94829 963 aaKnown RBP7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 LCA5LO95447 670 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 IGHEP01854 428 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 CAPN1P07384 714 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 MTHFD1P11586 935 aaKnown RBP7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 SKILP12757 684 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 POLR2CP19387 275 aaPredicted RBP7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 AGXTP21549 392 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 CDH3P22223 829 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 PBLDP30039 288 aaPredicted RBP7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 HNRNPH3P31942 346 aaKnown RBP7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 RORAP35398 523 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 GJC1P36383 396 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 ARCN1P48444 511 aaKnown RBP7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 MYL5Q02045 173 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 GBE1Q04446 702 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 DMPKQ09013 629 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 ABRQ12979 859 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 PRKAA1Q13131 559 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 KRT33BQ14525 404 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 NCF4Q15080 339 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 PCSK7Q16549 785 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 PTCHD3Q3KNS1 767 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 ATP13A4Q4VNC1 1196 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 MLIPQ5VWP3 458 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 TMEM220Q6QAJ8 160 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 FAM198BQ6UWH4 519 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 IGFL3Q6UXB1 125 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 NT5DC3Q86UY8 548 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 MAP7D3Q8IWC1 876 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 SYTL1Q8IYJ3 562 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 CARFQ8N187 725 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 GALNT16Q8N428 558 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 BEND7Q8N7W2 519 aaPredicted RBP7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 NIPA2Q8N8Q9 360 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 CLEC1AQ8NC01 280 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 ST6GALNAC3Q8NDV1 305 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 UBE2Q2Q8WVN8 375 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 ZFPM2Q8WW38 1151 aa7.73□□□□□ -1.17
NSMCE2-213ENST00000523824 TM9SF4Q92544 642 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms