RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	NUDT11	Q96G61	164 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	TCEANC2	Q96MN5	208 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	SLC2A13	Q96QE2	648 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	HEPH	Q9BQS7	1158 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	GPR63	Q9BZJ6	419 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	TRIM9	Q9C026	710 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	QRSL1	Q9H0R6	528 aa	Known RBP	5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	MMADHC	Q9H3L0	296 aa	Predicted RBP	5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	PSTPIP2	Q9H939	334 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	COPS7B	Q9H9Q2	264 aa	Predicted RBP	5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	BARX1	Q9HBU1	254 aa	Predicted RBP	5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	PDE11A	Q9HCR9	933 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	NRBP2	Q9NSY0	501 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	TAS2R3	Q9NYW6	316 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	GCNT4	Q9P109	453 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	C5AR2	Q9P296	337 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	HOOK1	Q9UJC3	728 aa	Known RBP	5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	ADAM29	Q9UKF5	820 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	GRID1	Q9ULK0	1009 aa		5.15	□□□□□ -1.59
PABPC1-223	ENST00000523636	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	5.14	□□□□□ -1.59	1e-6	■■■■■ 30.6
PABPC1-223	ENST00000523636	PCLO	Q9Y6V0	5065 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636		A0A1B0GUA9	196 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636		A0A1W2PR77	199 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	TMCO5B	A8MYB1	307 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	C10orf142	B7Z368	130 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636		F8VZ95	297 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636		H7C4K7	107 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	PSMA7	O14818	248 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	VILL	O15195	856 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	DFNA5	O60443	496 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	TSPAN9	O75954	239 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	CDKL5	O76039	1030 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	TNFRSF6B	O95407	300 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	NFATC1	O95644	943 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	FGF19	O95750	216 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	IFNB1	P01574	187 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	CYP1A1	P04798	512 aa	Predicted RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	EDN1	P05305	212 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	IGHV4-34	P06331	123 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	ITGA2B	P08514	1039 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	CYP21A2	P08686	494 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	DDX6	P26196	483 aa	Known RBP eCLIP	5.14	□□□□□ -1.59	2e-74	■■□□□ 11.6
PABPC1-223	ENST00000523636	GNL1	P36915	607 aa	Predicted RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	CPA2	P48052	419 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	ANTXR2	P58335	489 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	PTEN	P60484	403 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	TPM4	P67936	248 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	CTAG1A	P78358	180 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	KIF5A	Q12840	1032 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	PRPF4B	Q13523	1007 aa	Known RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	SLC12A1	Q13621	1099 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	BMPR2	Q13873	1038 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	TOB2	Q14106	344 aa	Predicted RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	MXD4	Q14582	209 aa	Predicted RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	LACTB2	Q53H82	288 aa	Predicted RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	ATPAF1	Q5TC12	328 aa	Predicted RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	ATF7IP2	Q5U623	682 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	WDR93	Q6P2C0	686 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	SLC27A1	Q6PCB7	646 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	KLHDC10	Q6PID8	442 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	IKBIP	Q70UQ0	350 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636		Q71RC1	249 aa	Predicted RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	TAOK1	Q7L7X3	1001 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	RAB11FIP2	Q7L804	512 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	NIPA1	Q7RTP0	329 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	TMPRSS9	Q7Z410	1059 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	GDF7	Q7Z4P5	450 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	R3HCC1L	Q7Z5L2	792 aa	Known RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	GLB1L2	Q8IW92	636 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	TXLNB	Q8N3L3	684 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	SLC25A45	Q8N413	288 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	C10orf53	Q8N6V4	93 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	GLIS1	Q8NBF1	620 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	TP53I13	Q8NBR0	393 aa	Predicted RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	RNF149	Q8NC42	400 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	RFWD2	Q8NHY2	731 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	SNX19	Q92543	992 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	ESR2	Q92731	530 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	GFM2	Q969S9	779 aa	Known RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	LENG9	Q96B70	501 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	TUBGCP3	Q96CW5	907 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	LENG8	Q96PV6	779 aa	Predicted RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	TXN2	Q99757	166 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	SPX	Q9BT56	116 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	KRT23	Q9C075	422 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	WNT5B	Q9H1J7	359 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	NDST4	Q9H3R1	872 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	CLSTN2	Q9H4D0	955 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	SNTG1	Q9NSN8	517 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	SEPT11	Q9NVA2	429 aa	Known RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	UBAP1	Q9NZ09	502 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	CPSF3	Q9UKF6	684 aa	Known RBP	5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	RCOR1	Q9UKL0	485 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	CAMK2A	Q9UQM7	478 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	ZGRF1	Q86YA3	2104 aa		5.14	□□□□□ -1.59
PABPC1-223	ENST00000523636	UNC13C	Q8NB66	2214 aa		5.13	□□□□□ -1.59
PABPC1-223	ENST00000523636		A0A0A6YYK5	440 aa	Predicted RBP	5.13	□□□□□ -1.59
PABPC1-223	ENST00000523636	GOLGA6L10	A0A0M3HER8	536 aa		5.13	□□□□□ -1.59
PABPC1-223	ENST00000523636	FAM234B	A2RU67	622 aa		5.13	□□□□□ -1.59
PABPC1-223	ENST00000523636	BECN2	A8MW95	431 aa		5.13	□□□□□ -1.59

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