RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 WWP1Q9H0M0 922 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 LRRC40Q9H9A6 602 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 CRLS1Q9UJA2 301 aa18.3■□□□□ 0.52
SPIDR-220ENST00000522900 RAD1O60671 282 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 AP2A1O95782 977 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 POLBP06746 335 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 ANKRD34CP0C6C1 535 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 MC4RP32245 332 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 CAPZBP47756 277 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 GSDMDP57764 484 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 SH3BP2P78314 561 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 POU6F1Q14863 301 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 OASLQ15646 514 aaKnown RBP18.29■□□□□ 0.52
SPIDR-220ENST00000522900 LINC00303Q3SY05 128 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 BCL7AQ4VC05 210 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 DUS1LQ6P1R4 473 aaKnown RBP18.29■□□□□ 0.52
SPIDR-220ENST00000522900 FAM92BQ6ZTR7 304 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 TIPARPQ7Z3E1 657 aaKnown RBP18.29■□□□□ 0.52
SPIDR-220ENST00000522900 SNX20Q7Z614 316 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 SLC13A5Q86YT5 568 aaPredicted RBP18.29■□□□□ 0.52
SPIDR-220ENST00000522900 DCUN1D1Q96GG9 259 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 TSGA10Q9BZW7 698 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 IMP3Q9NV31 184 aaKnown RBP18.29■□□□□ 0.52
SPIDR-220ENST00000522900 NLE1Q9NVX2 485 aaPredicted RBP18.29■□□□□ 0.52
SPIDR-220ENST00000522900 PILRAQ9UKJ1 303 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 AHCTF1Q8WYP5 2266 aa18.29■□□□□ 0.52
SPIDR-220ENST00000522900 CCDC78A2IDD5 438 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 GOLGA6L6A8MZA4 724 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 POLR1CO15160 346 aaPredicted RBP18.28■□□□□ 0.52
SPIDR-220ENST00000522900 KRT86O43790 486 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 MTHFD1P11586 935 aaKnown RBP18.28■□□□□ 0.52
SPIDR-220ENST00000522900 ETS1P14921 441 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 LIFP15018 202 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 ITGALP20701 1170 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 HADHAP40939 763 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 ATP1A2P50993 1020 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 SNX1Q13596 522 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 SEPT6Q14141 434 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 ZRANB3Q5FWF4 1079 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 SEL1L2Q5TEA6 688 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 MEI1Q5TIA1 1274 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 IRGCQ6NXR0 463 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 CEACAM20Q6UY09 585 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 CFAP206Q8IYR0 622 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 CACNA2D3Q8IZS8 1091 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 IL22RA1Q8N6P7 574 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 EXD3Q8N9H8 876 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 OR52K1Q8NGK4 314 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 ULK4Q96C45 1275 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 LRRC45Q96CN5 670 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 LINC00615Q96LM1 132 aaPredicted RBP18.28■□□□□ 0.52
SPIDR-220ENST00000522900 C12orf66Q96MD2 445 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 TEFMQ96QE5 360 aaKnown RBP18.28■□□□□ 0.52
SPIDR-220ENST00000522900 COPS8Q99627 209 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 C19orf43Q9BQ61 176 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 ZNF768Q9H5H4 540 aaKnown RBP18.28■□□□□ 0.52
SPIDR-220ENST00000522900 ETNK1Q9HBU6 452 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 EPHA6Q9UF33 1036 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 SDK2Q58EX2 2172 aa18.28■□□□□ 0.52
SPIDR-220ENST00000522900 TRBV5-4A0A0C4DH59 114 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 PSMD3O43242 534 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 RASSF9O75901 435 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 ATP1B2P14415 290 aaPredicted RBP18.27■□□□□ 0.52
SPIDR-220ENST00000522900 STIP1P31948 543 aaKnown RBP18.27■□□□□ 0.52
SPIDR-220ENST00000522900 FOXM1Q08050 763 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 P3H1Q32P28 736 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 CCDC38Q502W7 563 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 CACHD1Q5VU97 1274 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 TAS2R42Q7RTR8 314 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 SERPINA9Q86WD7 417 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 PIANPQ8IYJ0 282 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 EXTL1Q92935 676 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 CDKN2AIPNLQ96HQ2 116 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 LZTFL1Q9NQ48 299 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 ZDHHC3Q9NYG2 299 aa18.27■□□□□ 0.52
SPIDR-220ENST00000522900 IGLV3-16A0A075B6K0 115 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 LOC101059948A0A1B0GTJ6 334 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 MROH6A6NGR9 719 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 H7C0S8 307 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 TOX3O15405 576 aaPredicted RBP18.26■□□□□ 0.51
SPIDR-220ENST00000522900 ARHGAP6O43182 974 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 STK17BO94768 372 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 IFNB1P01574 187 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 RALBP11234 206 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 ZNF28P17035 718 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 ACRV1P26436 265 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 GRIA1P42261 906 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 PRLHRP49683 370 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 RPS6KA1Q15418 735 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 SIX1Q15475 284 aaPredicted RBP18.26■□□□□ 0.51
SPIDR-220ENST00000522900 GPR33Q49SQ1 333 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 CAPRIN2Q6IMN6 1127 aaKnown RBP18.26■□□□□ 0.51
SPIDR-220ENST00000522900 PRSS42Q7Z5A4 293 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 UNC5BQ8IZJ1 945 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 CLDN19Q8N6F1 224 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 ZSCAN1Q8NBB4 408 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 GLIS1Q8NBF1 620 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 STYXQ8WUJ0 223 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 KLHL6Q8WZ60 621 aa18.26■□□□□ 0.51
SPIDR-220ENST00000522900 ZDHHC12Q96GR4 267 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms