RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 CD1CP29017 333 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 CCR1P32246 355 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 GTF2H1P32780 548 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 RPL34P49207 117 aaKnown RBP6.32□□□□□ -1.4
VPS13B-211ENST00000522802 CDKN1CP49918 316 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-211ENST00000522802 BLKP51451 505 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 LIMK2P53671 638 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 PMS2P54278 862 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 CDH4P55283 916 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 LRMPQ12912 555 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 NR1D2Q14995 579 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 PDCD1Q15116 288 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 WSCD2Q2TBF2 565 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 EDRF1Q3B7T1 1238 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 ZNF805Q5CZA5 627 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 CARD16Q5EG05 197 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 DCAF12Q5T6F0 453 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 DENND1BQ6P3S1 775 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 TMEM270Q6UE05 265 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 BEND5Q7L4P6 421 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 TAF8Q7Z7C8 310 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 PCDH20Q8N6Y1 951 aaKnown RBP6.32□□□□□ -1.4
VPS13B-211ENST00000522802 LINC00301Q8NCQ3 95 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 CCDC112Q8NEF3 446 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 PATE1Q8WXA2 126 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 KAT5Q92993 513 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 MOCOSQ96EN8 888 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 HSFY1Q96LI6 401 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 HAPLN3Q96S86 360 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 DPEP2Q9H4A9 486 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 ZCCHC4Q9H5U6 513 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 MAGEF1Q9HAY2 307 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 POPDC2Q9HBU9 364 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 APMAPQ9HDC9 416 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS13B-211ENST00000522802 CDC42EP3Q9UKI2 254 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 ZDHHC9Q9Y397 364 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 NAV3Q8IVL0 2385 aa6.32□□□□□ -1.4
VPS13B-211ENST00000522802 A0A0A6YYJ9 748 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 PRSS38A1L453 326 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 B4E171 279 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 TOR1BO14657 336 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 CALUO43852 315 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 KDM1AO60341 852 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 TM7SF2O76062 418 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 APOL3O95236 402 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 CD160O95971 181 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 PAEPP09466 180 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 HTR1BP28222 390 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 CSTF2P33240 577 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 TSPAN7P41732 249 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 PEX5P50542 639 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 COPB1P53618 953 aaKnown RBP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 YWHAZP63104 245 aaKnown RBP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 ENPEPQ07075 957 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 ABHD18Q0P651 414 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 NME3Q13232 169 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 ERV3-1Q14264 604 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 STK38Q15208 465 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 INPP5JQ15735 1006 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 C5orf22Q49AR2 442 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 ZCWPW2Q504Y3 356 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 DCAF17Q5H9S7 520 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 ATXN7L2Q5T6C5 722 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 LEKR1Q6ZMV7 388 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 LARP4Q71RC2 724 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 KDELC2Q7Z4H8 507 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 CXorf67Q86X51 503 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 KBTBD2Q8IY47 623 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 RYBPQ8N488 228 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 Q8NA96 180 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 PLA2G15Q8NCC3 412 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 OR4D9Q8NGE8 314 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 CXorf40AQ8TE69 158 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 RAB7BQ96AH8 199 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 WDR92Q96MX6 357 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 KLHL32Q96NJ5 620 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 SLC2A13Q96QE2 648 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 PPP1R9BQ96SB3 815 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 APOOQ9BUR5 198 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 C1QTNF7Q9BXJ2 289 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 ASPSCR1Q9BZE9 553 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 INTS2Q9H0H0 1204 aaKnown RBP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 SIK2Q9H0K1 926 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 SUDS3Q9H7L9 328 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 SPATS2LQ9NUQ6 558 aaKnown RBP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 MPP6Q9NZW5 540 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 HECAQ9UBI9 543 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 ZNF212Q9UDV6 495 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 TMPRSS11EQ9UL52 423 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 DGKBQ9Y6T7 804 aa6.31□□□□□ -1.4
VPS13B-211ENST00000522802 DIDO1Q9BTC0 2240 aaKnown RBP6.31□□□□□ -1.4
VPS13B-211ENST00000522802 ANKHD1Q8IWZ3 2542 aaKnown RBP6.3□□□□□ -1.4
VPS13B-211ENST00000522802 IGHV1OR21-1A0A087WYE8 117 aa6.3□□□□□ -1.4
VPS13B-211ENST00000522802 RHPN2P1A8MT19 583 aa6.3□□□□□ -1.4
VPS13B-211ENST00000522802 A8MU76 341 aa6.3□□□□□ -1.4
VPS13B-211ENST00000522802 KRT86O43790 486 aa6.3□□□□□ -1.4
VPS13B-211ENST00000522802 DIAPH2O60879 1101 aa6.3□□□□□ -1.4
VPS13B-211ENST00000522802 GRAP2O75791 330 aa6.3□□□□□ -1.4
VPS13B-211ENST00000522802 PRKD3O94806 890 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms