RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 SLC36A3Q495N2 470 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 EPC2Q52LR7 807 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 FNDC3BQ53EP0 1204 aaKnown RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 CRTC2Q53ET0 693 aaPredicted RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 ADGRD1Q6QNK2 874 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PIWIL2Q8TC59 973 aaKnown RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 POF1BQ8WVV4 589 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 EDARADDQ8WWZ3 215 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PTERQ96BW5 349 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 CRELD1Q96HD1 420 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 OR5M11Q96RB7 305 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 UHRF1Q96T88 793 aaPredicted RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 RTKNQ9BST9 563 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 ADI1Q9BV57 179 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 C11orf49Q9H6J7 331 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 MRPS30Q9NP92 439 aaKnown RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 TREM1Q9NP99 234 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PRDM5Q9NQX1 630 aaPredicted RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 ABCC13Q9NSE7 274 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 ZFP57Q9NU63 452 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 AKAP7Q9P0M2 348 aaPredicted RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 COPZ2Q9P299 210 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 TNFSF13BQ9Y275 285 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 NAALAD2Q9Y3Q0 740 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 CRB1P82279 1406 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 K7ERQ8 282 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PITPNM1O00562 1244 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 NKRFO15226 690 aaKnown RBP eCLIP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 INPPL1O15357 1258 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 VEGFDO43915 354 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 H2AFYO75367 372 aaKnown RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PDE9AO76083 593 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 TOP3BO95985 862 aaKnown RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 S100A8P05109 93 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 RALBP11234 206 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 HNRNPLP14866 589 aaKnown RBP eCLIP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 ATP2B4P23634 1241 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 IVDP26440 423 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 IL1R2P27930 398 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 POLR2IP36954 125 aaKnown RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 ETV4P43268 484 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PREPP48147 710 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 CCT3P49368 545 aaKnown RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 CLCN5P51795 746 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PSPHP78330 225 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 ZNF45Q02386 682 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 MERTKQ12866 999 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PTK6Q13882 451 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PTPRRQ15256 657 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 KIF19Q2TAC6 998 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PMF1Q6P1K2 205 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 SSX9Q7RTT3 188 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 TMC8Q8IU68 726 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 NIM1KQ8IY84 436 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 SFRP1Q8N474 314 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 OR13J1Q8NGT2 312 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 ROBO4Q8WZ75 1007 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PPWD1Q96BP3 646 aaKnown RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 TMCO6Q96DC7 493 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 FCRL4Q96PJ5 515 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 PTDSS2Q9BVG9 487 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 MND1Q9BWT6 205 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 ACTR6Q9GZN1 396 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 BTBD1Q9H0C5 482 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 CCDC8Q9H0W5 538 aaPredicted RBP8.2□□□□□ -1.1
HMGB4-204ENST00000522796 CATSPERZQ9NTU4 200 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 SLC17A7Q9P2U7 560 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 CDY2AQ9Y6F7 541 aa8.2□□□□□ -1.1
HMGB4-204ENST00000522796 ANKRD36CQ5JPF3 1778 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 MRC1P22897 1456 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 TRIM49D1C9J1S8 452 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 GP1BAP07359 652 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 TMEM191BP0C7N4 346 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ODC1P11926 461 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 IL13P35225 146 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 PER3P56645 1201 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 KLHL12Q53G59 568 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ARMCX4Q5H9R4 360 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 GPR158Q5T848 1215 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 MROH9Q5TGP6 573 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 LIN9Q5TKA1 542 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 KRT39Q6A163 491 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ELP2Q6IA86 826 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 TIGD7Q6NT04 549 aaPredicted RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 C16orf89Q6UX73 402 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ZBTB49Q6ZSB9 765 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 TRMT11Q7Z4G4 463 aaKnown RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 POLNQ7Z5Q5 900 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 DENND6AQ8IWF6 608 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 PRSS58Q8IYP2 241 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 OR8H3Q8N146 312 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 EFCAB3Q8N7B9 438 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 OR6M1Q8NGM8 313 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 DYNC2LI1Q8TCX1 351 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 TFB1MQ8WVM0 346 aaKnown RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 RPL3LQ92901 407 aaKnown RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 CPNE4Q96A23 557 aaPredicted RBP8.19□□□□□ -1.1
HMGB4-204ENST00000522796 NTAN1Q96AB6 310 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 C10orf90Q96M02 699 aa8.19□□□□□ -1.1
HMGB4-204ENST00000522796 ZSWIM3Q96MP5 696 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms