RNA–Protein interactions for RNA: ENST00000520254.5

FAM49B-217, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-217ENST00000520254 SATB2Q9UPW6 733 aa18.69■□□□□ 0.58
FAM49B-217ENST00000520254 NEU2Q9Y3R4 380 aa18.69■□□□□ 0.58
FAM49B-217ENST00000520254 MAD1L1Q9Y6D9 718 aa18.69■□□□□ 0.58
FAM49B-217ENST00000520254 ZFC3H1O60293 1989 aaKnown RBP18.69■□□□□ 0.58
FAM49B-217ENST00000520254 PLXNB3Q9ULL4 1909 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 C17orf113A0A1B0GUU1 675 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 DNALI1O14645 258 aaPredicted RBP18.68■□□□□ 0.58
FAM49B-217ENST00000520254 AVILO75366 819 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 NDUFS3O75489 264 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 JMJD7P0C870 316 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 AMD1P17707 334 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 NMBRP28336 390 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 CD1CP29017 333 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 DNAJC21Q5F1R6 531 aaKnown RBP18.68■□□□□ 0.58
FAM49B-217ENST00000520254 FAM83HQ6ZRV2 1179 aaPredicted RBP18.68■□□□□ 0.58
FAM49B-217ENST00000520254 TMEM26Q6ZUK4 368 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 B3GNT8Q7Z7M8 397 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 HOOK3Q86VS8 718 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 JAMLQ86YT9 394 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 CLDN19Q8N6F1 224 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 KDF1Q8NAX2 398 aaPredicted RBP18.68■□□□□ 0.58
FAM49B-217ENST00000520254 NCSTNQ92542 709 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 TMEM159Q96B96 161 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 SGSM3Q96HU1 749 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 C16orf45Q96MC5 204 aaPredicted RBP18.68■□□□□ 0.58
FAM49B-217ENST00000520254 C12orf66Q96MD2 445 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 CMKLR1Q99788 373 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 UCK1Q9HA47 277 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 TREX1Q9NSU2 369 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 HEBP2Q9Y5Z4 205 aa18.68■□□□□ 0.58
FAM49B-217ENST00000520254 ARHGEF17Q96PE2 2063 aaPredicted RBP18.67■□□□□ 0.58
FAM49B-217ENST00000520254 CHD8Q9HCK8 2581 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 PRR19A6NJB7 356 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 CASC3O15234 703 aaKnown RBP18.67■□□□□ 0.58
FAM49B-217ENST00000520254 BRINP1O60477 761 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 VAPBO95292 243 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 BRAFP15056 766 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 SLC19A1P41440 591 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 LSSP48449 732 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 PDX1P52945 283 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 CLCA4Q14CN2 919 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 RPE65Q16518 533 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 RNF187Q5TA31 235 aaPredicted RBP18.67■□□□□ 0.58
FAM49B-217ENST00000520254 RNASEH2BQ5TBB1 312 aaKnown RBP18.67■□□□□ 0.58
FAM49B-217ENST00000520254 KIAA0930Q6ICG6 404 aaPredicted RBP18.67■□□□□ 0.58
FAM49B-217ENST00000520254 KLHL35Q6PF15 583 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 RAB11FIP2Q7L804 512 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 CAND1Q86VP6 1230 aaKnown RBP18.67■□□□□ 0.58
FAM49B-217ENST00000520254 FBXO39Q8N4B4 442 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 NAT8LQ8N9F0 302 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 OR4D9Q8NGE8 314 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 ELMO1Q92556 727 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 ZNF669Q96BR6 464 aaPredicted RBP18.67■□□□□ 0.58
FAM49B-217ENST00000520254 MFSD3Q96ES6 412 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 KRT12Q99456 494 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 NUDT22Q9BRQ3 303 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 COG4Q9H9E3 785 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 THSD1Q9NS62 852 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 ZNF624Q9P2J8 865 aaPredicted RBP18.67■□□□□ 0.58
FAM49B-217ENST00000520254 DKK4Q9UBT3 224 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 WDR37Q9Y2I8 494 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 COLEC10Q9Y6Z7 277 aa18.67■□□□□ 0.58
FAM49B-217ENST00000520254 FAM237BA0A1B0GVD1 139 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 UBA6A0AVT1 1052 aaPredicted RBP18.66■□□□□ 0.58
FAM49B-217ENST00000520254 SMAPO00193 183 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 LIN7AO14910 233 aaPredicted RBP18.66■□□□□ 0.58
FAM49B-217ENST00000520254 PLD2O14939 933 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 UBXN7O94888 489 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 MTHFD1P11586 935 aaKnown RBP18.66■□□□□ 0.58
FAM49B-217ENST00000520254 NDUFS1P28331 727 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 PLOD1Q02809 727 aaPredicted RBP18.66■□□□□ 0.58
FAM49B-217ENST00000520254 CKAP4Q07065 602 aaKnown RBP18.66■□□□□ 0.58
FAM49B-217ENST00000520254 RPA4Q13156 261 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 TRA2AQ13595 282 aaKnown RBP eCLIP18.66■□□□□ 0.58
FAM49B-217ENST00000520254 THOC5Q13769 683 aaKnown RBP18.66■□□□□ 0.58
FAM49B-217ENST00000520254 BOP1Q14137 746 aaKnown RBP18.66■□□□□ 0.58
FAM49B-217ENST00000520254 TMED2Q15363 201 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 SNAP47Q5SQN1 464 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 PTRHD1Q6GMV3 140 aaKnown RBP18.66■□□□□ 0.58
FAM49B-217ENST00000520254 TMEM71Q6P5X7 295 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 CES3Q6UWW8 571 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 PLXDC1Q8IUK5 500 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 GABPB2Q8TAK5 448 aaPredicted RBP18.66■□□□□ 0.58
FAM49B-217ENST00000520254 GSDMBQ8TAX9 411 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 CCDC97Q96F63 343 aaPredicted RBP18.66■□□□□ 0.58
FAM49B-217ENST00000520254 STAMBPL1Q96FJ0 436 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 SNF8Q96H20 258 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 CCDC74BQ96LY2 380 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 TBC1D10AQ9BXI6 508 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 SLC40A1Q9NP59 571 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 GNPTGQ9UJJ9 305 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 ZMIZ1Q9ULJ6 1067 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 VPS9D1Q9Y2B5 631 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 LOXL2Q9Y4K0 774 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 RPS6KL1Q9Y6S9 549 aa18.66■□□□□ 0.58
FAM49B-217ENST00000520254 ACACBO00763 2458 aa18.65■□□□□ 0.58
FAM49B-217ENST00000520254 RP1P56715 2156 aa18.65■□□□□ 0.58
FAM49B-217ENST00000520254 ASXL3Q9C0F0 2248 aa18.65■□□□□ 0.58
FAM49B-217ENST00000520254 BPTFQ12830 3046 aa18.65■□□□□ 0.58
FAM49B-217ENST00000520254 PRMT5O14744 637 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms