RNA–Protein interactions for RNA: ENST00000520102.1

CHMP7-208, Transcript of charged multivesicular body protein 7, human

TSL 4

Gene CHMP7, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP7-208	ENST00000520102	BLOC1S5	Q8TDH9	187 aa		7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	NAT14	Q8WUY8	206 aa		7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	TFB1M	Q8WVM0	346 aa	Known RBP	7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	OXNAD1	Q96HP4	312 aa	Predicted RBP	7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	ZNF514	Q96K75	400 aa	Predicted RBP	7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	PPM1M	Q96MI6	270 aa		7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	FCRL4	Q96PJ5	515 aa		7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	INSM2	Q96T92	566 aa	Predicted RBP	7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	DNAJC7	Q99615	494 aa		7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	GPR87	Q9BY21	358 aa		7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	ZCCHC2	Q9C0B9	1178 aa	Known RBP	7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	DEF6	Q9H4E7	631 aa		7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	SPTLC3	Q9NUV7	552 aa		7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	IMP3	Q9NV31	184 aa	Known RBP	7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	HRASLS2	Q9NWW9	162 aa		7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	FAM153A	Q9UHL3	310 aa		7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	7.68	□□□□□ -1.18
CHMP7-208	ENST00000520102	UBA6	A0AVT1	1052 aa	Predicted RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	ARGFX	A6NJG6	315 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	DDX3Y	O15523	660 aa	Known RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	CST8	O60676	142 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	CPNE3	O75131	537 aa	Known RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	VPS4B	O75351	444 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	SCRG1	O75711	98 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	EPO	P01588	193 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	GNLY	P22749	145 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	CDKN2B	P42772	138 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	ARCN1	P48444	511 aa	Known RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	NR2C2	P49116	596 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	ARL4D	P49703	201 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	KPNA2	P52292	529 aa	Known RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	RPS15	P62841	145 aa	Known RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	TUBB4B	P68371	445 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	HSD11B2	P80365	405 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	GPS2	Q13227	327 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	XRCC4	Q13426	336 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	ITGA9	Q13797	1035 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	TUBB2A	Q13885	445 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	TAZ	Q16635	292 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	NADK2	Q4G0N4	442 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	ODF2	Q5BJF6	829 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	FNBP1L	Q5T0N5	605 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	PRAMEF17	Q5VTA0	474 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	METRNL	Q641Q3	311 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	KAZN	Q674X7	775 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	HIST2H2BC	Q6DN03	193 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	CAPRIN2	Q6IMN6	1127 aa	Known RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	LCN10	Q6JVE6	187 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	FBXO38	Q6PIJ6	1188 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	ZNF517	Q6ZMY9	492 aa	Predicted RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	DET1	Q7L5Y6	550 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	SYVN1	Q86TM6	617 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	ZC3H18	Q86VM9	953 aa	Known RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	BPHL	Q86WA6	291 aa	Predicted RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	TMEM126B	Q8IUX1	230 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	RHOT2	Q8IXI1	618 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	RHOT1	Q8IXI2	618 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	ZNF567	Q8N184	647 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	IPMK	Q8NFU5	416 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	SPDYE1	Q8NFV5	336 aa	Predicted RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	OR8K1	Q8NGG5	319 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	CPT1C	Q8TCG5	803 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	THAP4	Q8WY91	577 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	SEC14L1	Q92503	715 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	MR1	Q95460	341 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	ZNF501	Q96CX3	271 aa	Predicted RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	C12orf66	Q96MD2	445 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	FCRL5	Q96RD9	977 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	CD180	Q99467	661 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	CHP1	Q99653	195 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	SLC25A23	Q9BV35	468 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	TUBB2B	Q9BVA1	445 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	WWP1	Q9H0M0	922 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	ING2	Q9H160	280 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	LRRC4C	Q9HCJ2	640 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	MLXIPL	Q9NP71	852 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	SMOX	Q9NWM0	555 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	DDX56	Q9NY93	547 aa	Known RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	HACD3	Q9P035	362 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	KLHL8	Q9P2G9	620 aa	Predicted RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	FAM8A1	Q9UBU6	413 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	VPS4A	Q9UN37	437 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	PKP3	Q9Y446	797 aa		7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.67	□□□□□ -1.18
CHMP7-208	ENST00000520102	OR6C74	A6NCV1	312 aa		7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	MGAT4D	A6NG13	374 aa		7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	SGTA	O43765	313 aa		7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	SPOP	O43791	374 aa		7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	SORBS2	O94875	1100 aa	Known RBP	7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	PRAMEF1	O95521	474 aa		7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	ZBTB11	O95625	1053 aa	Predicted RBP	7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	HLA-DPA1	P20036	260 aa		7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	MSH3	P20585	1137 aa		7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	COMT	P21964	271 aa		7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	LPO	P22079	712 aa	Predicted RBP	7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	AKT1	P31749	480 aa		7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	SLC1A1	P43005	524 aa		7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	PTGIR	P43119	386 aa		7.66	□□□□□ -1.18
CHMP7-208	ENST00000520102	TNNT3	P45378	269 aa	Predicted RBP	7.66	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms