RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 ARL1P40616 181 aaPredicted RBP2.31□□□□□ -2.04
PCM1-208ENST00000518877 MMP15P51511 669 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 EIF3BP55884 814 aaKnown RBP2.31□□□□□ -2.04
PCM1-208ENST00000518877 SNX16P57768 344 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 ZRSR2Q15696 482 aaKnown RBP2.31□□□□□ -2.04
PCM1-208ENST00000518877 ARHGEF16Q5VV41 709 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 ALS2CLQ60I27 953 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 TMEM198Q66K66 360 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 SMC5Q8IY18 1101 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 SMAP1Q8IYB5 467 aaPredicted RBP2.31□□□□□ -2.04
PCM1-208ENST00000518877 EXOC8Q8IYI6 725 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 PM20D2Q8IYS1 436 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 RASGEF1CQ8N431 466 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 SLC5A8Q8N695 610 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 PAF1Q8N7H5 531 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 OR1J2Q8NGS2 313 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 OR2L2Q8NH16 312 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 SAAL1Q96ER3 474 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 SEMA3CQ99985 751 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 SYT15Q9BQS2 421 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 RANBP17Q9H2T7 1088 aaKnown RBP2.31□□□□□ -2.04
PCM1-208ENST00000518877 PRKRIP1Q9H875 184 aaPredicted RBP2.31□□□□□ -2.04
PCM1-208ENST00000518877 PREBQ9HCU5 417 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 RANGRFQ9HD47 186 aaPredicted RBP2.31□□□□□ -2.04
PCM1-208ENST00000518877 STK39Q9UEW8 545 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 SLC13A4Q9UKG4 626 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 KLK13Q9UKR3 277 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.31□□□□□ -2.04
PCM1-208ENST00000518877 B3GALT5Q9Y2C3 310 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 YIPF1Q9Y548 306 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 PIAS3Q9Y6X2 628 aa2.31□□□□□ -2.04
PCM1-208ENST00000518877 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 A0A087WW49 117 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 CCDC196A0A1B0GTZ2 297 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 A0A1W2PPH5 198 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 EIF4E1BA6NMX2 242 aaKnown RBP2.3□□□□□ -2.04
PCM1-208ENST00000518877 C15orf62A8K5M9 175 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 TRMUO75648 421 aaKnown RBP2.3□□□□□ -2.04
PCM1-208ENST00000518877 EIF3JO75822 258 aaKnown RBP2.3□□□□□ -2.04
PCM1-208ENST00000518877 AP2A2O94973 939 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 CSPG5O95196 566 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 BMP10O95393 424 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 TBX18O95935 607 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 RAF1P04049 648 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 NFKBIAP25963 317 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 CCR9P51686 369 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 CTSCP53634 463 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 RARSP54136 660 aaKnown RBP2.3□□□□□ -2.04
PCM1-208ENST00000518877 PDE1CQ14123 709 aaPredicted RBP2.3□□□□□ -2.04
PCM1-208ENST00000518877 MED22Q15528 200 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 ZNF805Q5CZA5 627 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 SLC25A30Q5SVS4 291 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 NDUFAF5Q5TEU4 345 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 PAQR6Q6TCH4 344 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 SEPT14Q6ZU15 432 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 SDCCAG8Q86SQ7 713 aaPredicted RBP2.3□□□□□ -2.04
PCM1-208ENST00000518877 PTOV1Q86YD1 416 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 PLD3Q8IV08 490 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 GCSAMQ8N6F7 178 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 EMC1Q8N766 993 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 HJURPQ8NCD3 748 aaPredicted RBP2.3□□□□□ -2.04
PCM1-208ENST00000518877 OR2T12Q8NG77 320 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 HM13Q8TCT9 377 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 ZKSCAN4Q969J2 545 aaPredicted RBP2.3□□□□□ -2.04
PCM1-208ENST00000518877 GIMAP5Q96F15 307 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 SLC47A1Q96FL8 570 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 MBNL1Q9NR56 388 aaKnown RBP2.3□□□□□ -2.04
PCM1-208ENST00000518877 ECHDC1Q9NTX5 307 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 MTMR10Q9NXD2 777 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 TAS2R10Q9NYW0 307 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 UBA2Q9UBT2 640 aaPredicted RBP2.3□□□□□ -2.04
PCM1-208ENST00000518877 MAN1B1Q9UKM7 699 aa2.3□□□□□ -2.04
PCM1-208ENST00000518877 TMEM184BQ9Y519 407 aaPredicted RBP2.3□□□□□ -2.04
PCM1-208ENST00000518877 MYH15Q9Y2K3 1946 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 ARHGEF40Q8TER5 1519 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 IGHV4-4A0A075B6R2 117 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 IGKV6D-21A0A0A0MT36 114 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 FAM237BA0A1B0GVD1 139 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 KLLNB2CW77 178 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 GPR137BO60478 399 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 SEC14L2O76054 403 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 GCNT3O95395 438 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 CLEC3BP05452 202 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 KRTAP1-4P0C5Y4 121 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 SELLP14151 372 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 PTGER3P43115 390 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 RPL7AP62424 266 aaKnown RBP2.29□□□□□ -2.04
PCM1-208ENST00000518877 MS4A2Q01362 244 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 SP3Q02447 781 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 CSTF3Q12996 717 aaKnown RBP2.29□□□□□ -2.04
PCM1-208ENST00000518877 G3BP1Q13283 466 aaKnown RBP eCLIP2.29□□□□□ -2.04
PCM1-208ENST00000518877 GRAPQ13588 217 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 RAPSNQ13702 412 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 PNLIPRP3Q17RR3 467 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 GSTA5Q7RTV2 222 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 ISCA2Q86U28 154 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 C1orf52Q8N6N3 182 aaKnown RBP2.29□□□□□ -2.04
PCM1-208ENST00000518877 TSPYL6Q8N831 410 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 PPP4R1Q8TF05 950 aa2.29□□□□□ -2.04
PCM1-208ENST00000518877 SMPDL3BQ92485 455 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms