RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 CSO75390 466 aaKnown RBP21.55■■□□□ 1.04
VEGFA-217ENST00000518538 VIPP01282 170 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 FTH1P02794 183 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 OR56A5P0C7T3 313 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 RPL21P46778 160 aaKnown RBP21.55■■□□□ 1.04
VEGFA-217ENST00000518538 MRPS25P82663 173 aaKnown RBP21.55■■□□□ 1.04
VEGFA-217ENST00000518538 DHX9Q08211 1270 aaKnown RBP21.55■■□□□ 1.04
VEGFA-217ENST00000518538 CLPPQ16740 277 aaPredicted RBP21.55■■□□□ 1.04
VEGFA-217ENST00000518538 ISXQ2M1V0 245 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 CFAP206Q8IYR0 622 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 PDIK1LQ8N165 341 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 OTUD6BQ8N6M0 293 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 BBOF1Q8ND07 529 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 GPR150Q8NGU9 434 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 GRAMD1AQ96CP6 724 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 CXorf40BQ96DE9 158 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 ERP44Q9BS26 406 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 TMEM121BQ9BXQ6 578 aaPredicted RBP21.55■■□□□ 1.04
VEGFA-217ENST00000518538 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.55■■□□□ 1.04
VEGFA-217ENST00000518538 COG4Q9H9E3 785 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 UCK1Q9HA47 277 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 KCNK4Q9NYG8 393 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 PSMD13Q9UNM6 376 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 IGHV1OR21-1A0A087WYE8 117 aa21.54■■□□□ 1.04
VEGFA-217ENST00000518538 TP73O15350 636 aa21.54■■□□□ 1.04
VEGFA-217ENST00000518538 PGAM1P18669 254 aa21.54■■□□□ 1.04
VEGFA-217ENST00000518538 PDX1P52945 283 aa21.54■■□□□ 1.04
VEGFA-217ENST00000518538 GPLD1P80108 840 aa21.54■■□□□ 1.04
VEGFA-217ENST00000518538 TUBB2AQ13885 445 aa21.54■■□□□ 1.04
VEGFA-217ENST00000518538 TYSND1Q2T9J0 566 aa21.54■■□□□ 1.04
VEGFA-217ENST00000518538 MSS51Q4VC12 460 aa21.54■■□□□ 1.04
VEGFA-217ENST00000518538 SDCCAG8Q86SQ7 713 aaPredicted RBP21.54■■□□□ 1.04
VEGFA-217ENST00000518538 ZNF761Q86XN6 746 aaPredicted RBP21.54■■□□□ 1.04
VEGFA-217ENST00000518538 RBM12BQ8IXT5 1001 aaKnown RBP21.54■■□□□ 1.04
VEGFA-217ENST00000518538 LILRA3Q8N6C8 439 aaPredicted RBP21.54■■□□□ 1.04
VEGFA-217ENST00000518538 TUBB2BQ9BVA1 445 aa21.54■■□□□ 1.04
VEGFA-217ENST00000518538 SNX24Q9Y343 169 aa21.54■■□□□ 1.04
VEGFA-217ENST00000518538 LILRA5A6NI73 299 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 GOLGA8KD6RF30 607 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 GOLGA8TH3BQL2 631 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 PRMT5O14744 637 aaPredicted RBP21.53■■□□□ 1.04
VEGFA-217ENST00000518538 NDUFS3O75489 264 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 POLBP06746 335 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 SLC35G4P0C7Q5 338 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 OGNP20774 298 aaKnown RBP21.53■■□□□ 1.04
VEGFA-217ENST00000518538 CD1CP29017 333 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 EPHA4P54764 986 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 ARL4CP56559 192 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 RPA4Q13156 261 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 SQSTM1Q13501 440 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 RPE65Q16518 533 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 HIF1AQ16665 826 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 BBS9Q3SYG4 887 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 AMZ1Q400G9 498 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 MAP9Q49MG5 647 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 RNF187Q5TA31 235 aaPredicted RBP21.53■■□□□ 1.04
VEGFA-217ENST00000518538 NEPROQ6NW34 567 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 TCF12Q99081 682 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 EBNA1BP2Q99848 306 aaKnown RBP21.53■■□□□ 1.04
VEGFA-217ENST00000518538 NAT9Q9BTE0 207 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 WWP1Q9H0M0 922 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 SLC40A1Q9NP59 571 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 ATXN7L1Q9ULK2 861 aaPredicted RBP21.53■■□□□ 1.04
VEGFA-217ENST00000518538 ENTPD2Q9Y5L3 495 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 MRFAP1Q9Y605 127 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 FAM169AQ9Y6X4 670 aa21.53■■□□□ 1.04
VEGFA-217ENST00000518538 PFDN6O15212 129 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 BANF1O75531 89 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 CPNE6O95741 557 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 TTC4O95801 387 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 RPS3P23396 243 aaKnown RBP eCLIP21.52■■□□□ 1.042e-7■□□□□ 8.5
VEGFA-217ENST00000518538 THOC5Q13769 683 aaKnown RBP21.52■■□□□ 1.04
VEGFA-217ENST00000518538 LONRF1Q17RB8 773 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 DUPD1Q68J44 220 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 ZNF449Q6P9G9 518 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 TMEM26Q6ZUK4 368 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 LRRC6Q86X45 466 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 CILP2Q8IUL8 1156 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.52■■□□□ 1.04
VEGFA-217ENST00000518538 OR10G6Q8NH81 332 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 KIF18AQ8NI77 898 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 LRRC39Q96DD0 335 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 PWWP2AQ96N64 755 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 TMEM74Q96NL1 305 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 TSSK1BQ9BXA7 367 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 RAB17Q9H0T7 212 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 P2RY12Q9H244 342 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 IL1RAPL1Q9NZN1 696 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 WHRNQ9P202 907 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 UTP11Q9Y3A2 253 aaKnown RBP21.52■■□□□ 1.04
VEGFA-217ENST00000518538 PCDHB1Q9Y5F3 818 aa21.52■■□□□ 1.04
VEGFA-217ENST00000518538 LIN7AO14910 233 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-217ENST00000518538 MTHFD1P11586 935 aaKnown RBP21.51■■□□□ 1.03
VEGFA-217ENST00000518538 CALCOCO2Q13137 446 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 CRYMQ14894 314 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 NKAIN2Q5VXU1 208 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 CAPRIN2Q6IMN6 1127 aaKnown RBP21.51■■□□□ 1.03
VEGFA-217ENST00000518538 UNQ6494/PRO21346Q6UXR6 183 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 USP53Q70EK8 1073 aa21.51■■□□□ 1.03
VEGFA-217ENST00000518538 PIM3Q86V86 326 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms